RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 EXOSC3Q9NQT5 275 aaKnown RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 CLEC2DQ9UHP7 191 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 SIGLEC7Q9Y286 467 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 TRAV27A0A087WT01 109 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 A0A087WUJ7 227 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SNTNA6NMZ2 147 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 BMP7P18075 431 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 ABCD3P28288 659 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 GRK5P34947 590 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 GRK6P43250 576 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 GAS1P54826 345 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 RNF4P78317 190 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 MED22Q15528 200 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 AADACL4Q5VUY2 407 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SMARCD3Q6STE5 483 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 CBLN3Q6UW01 205 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 THSD4Q6ZMP0 1018 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SLCO6A1Q86UG4 719 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 TMCO5AQ8N6Q1 288 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 AGBL5Q8NDL9 886 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 LGALS12Q96DT0 336 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 RNFT2Q96EX2 444 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 RTN4RQ9BZR6 473 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SEMA4CQ9C0C4 833 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 MEN1O00255 615 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 BHLHE40O14503 412 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 HCN1O60741 890 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 RAB36O95755 333 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 ZNF883P0CG24 379 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 HSMCR30P0CW71 290 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 ZNF28P17035 718 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 AVPR2P30518 371 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 CCR4P51679 360 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 DOC2BQ14184 412 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 KLHL22Q53GT1 634 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 RNLSQ5VYX0 342 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 WBP2NLQ6ICG8 309 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SLC46A3Q7Z3Q1 461 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 C17orf47Q8NEP4 570 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 OR51A7Q8NH64 312 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 SPSB2Q99619 263 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 AKIRIN1Q9H9L7 192 aaPredicted RBP18.32■□□□□ 0.52
RTN1-202ENST00000342503 TIMMDC1Q9NPL8 285 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 MRPS18AQ9NVS2 196 aaKnown RBP18.32■□□□□ 0.52
RTN1-202ENST00000342503 ICAM5Q9UMF0 924 aa18.32■□□□□ 0.52
RTN1-202ENST00000342503 DIMT1Q9UNQ2 313 aaKnown RBP18.32■□□□□ 0.52
RTN1-202ENST00000342503 CPNE3O75131 537 aaKnown RBP18.31■□□□□ 0.52
RTN1-202ENST00000342503 CCL4P13236 92 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 ACP1P24666 158 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 PNLIPRP2P54317 469 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 VBP1P61758 197 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 DBX2Q6ZNG2 339 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 LNX2Q8N448 690 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 APCDD1LQ8NCL9 501 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 RPL3LQ92901 407 aaKnown RBP18.31■□□□□ 0.52
RTN1-202ENST00000342503 TNFRSF13CQ96RJ3 184 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 IFT27Q9BW83 186 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 LAT2Q9GZY6 243 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 SLC26A1Q9H2B4 701 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 RXFP3Q9NSD7 469 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 ERGIC3Q9Y282 383 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 LSM2Q9Y333 95 aaKnown RBP18.31■□□□□ 0.52
RTN1-202ENST00000342503 MUC3AQ02505 3323 aa18.31■□□□□ 0.52
RTN1-202ENST00000342503 COL27A1Q8IZC6 1860 aaPredicted RBP18.31■□□□□ 0.52
RTN1-202ENST00000342503 SLC22A1O15245 554 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 CSO75390 466 aaKnown RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 CDH11P55287 796 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 RAB40BQ12829 278 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 DYNC1I2Q13409 638 aaKnown RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 FHL1Q13642 323 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 PAPD4Q6PIY7 484 aaKnown RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 OAFQ86UD1 273 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 MARCH3Q86UD3 253 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 BBS1Q8NFJ9 593 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 RHBDD1Q8TEB9 315 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 TP53INP1Q96A56 240 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 SGTBQ96EQ0 304 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 LOXL4Q96JB6 756 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 KLHDC3Q9BQ90 382 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 WDR77Q9BQA1 342 aaPredicted RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 CRB3Q9BUF7 120 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 MCCC2Q9HCC0 563 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 FGF20Q9NP95 211 aaPredicted RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 HINT3Q9NQE9 182 aaKnown RBP18.3■□□□□ 0.52
RTN1-202ENST00000342503 PCDHGB2Q9Y5G2 931 aa18.3■□□□□ 0.52
RTN1-202ENST00000342503 EXPH5Q8NEV8 1989 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 DMDP11532 3685 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 A0A1W2PQD3 144 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 IRGMA1A4Y4 181 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 APOL3O95236 402 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 GP1BAP07359 652 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 GADD45AP24522 165 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 MTNR1AP48039 350 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 NCS1P62166 190 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 MC2RQ01718 297 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 ZNF117Q03924 483 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 TMEM44Q2T9K0 475 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 SLC35F1Q5T1Q4 408 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 MRPL14Q6P1L8 145 aaKnown RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 PAQR6Q6TCH4 344 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms