RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF660Q6AZW8 331 aaPredicted RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 SLC8B1Q6J4K2 584 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 METAP1DQ6UB28 335 aaPredicted RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 LYPD4Q6UWN0 246 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 MSANTD1Q6ZTZ1 278 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 USP30Q70CQ3 517 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SLC29A4Q7RTT9 530 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SZRD1Q7Z422 152 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 CMIPQ8IY22 773 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 DENND6BQ8NEG7 585 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SORCS1Q8WY21 1168 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 RSRP1Q9BUV0 290 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 EDEM2Q9BV94 578 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 CLN6Q9NWW5 311 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 KLK1P06870 262 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 ADRB3P13945 408 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 ITGA3P26006 1051 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 TIA1P31483 386 aaKnown RBP eCLIP11.73□□□□□ -0.53
DFFB-202ENST00000339350 CRISP1P54107 249 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 OR5M10Q6IEU7 315 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 Q6ZTK2 550 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 COMMD6Q7Z4G1 85 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 LRRTM4Q86VH4 590 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 CACNG6Q9BXT2 260 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 METTL9Q9H1A3 318 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 OPA3Q9H6K4 179 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 ZNF282Q9UDV7 671 aaPredicted RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 CHTOPQ9Y3Y2 248 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 MMACHCQ9Y4U1 282 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 NUMA1Q14980 2115 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 FFAR1O14842 300 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 OR10H3O60404 316 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 PRAMEF2O60811 474 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SOCS5O75159 536 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 RPLP2P05387 115 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 IMPA1P29218 277 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 OPRD1P41143 372 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 GFOD2Q3B7J2 385 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 FNDC3BQ53EP0 1204 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 KIAA1211LQ6NV74 962 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 FGD2Q7Z6J4 655 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 CBARPQ8N350 705 aaPredicted RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 TCEANCQ8N8B7 351 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SPATA5L1Q9BVQ7 753 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 RIOK2Q9BVS4 552 aaKnown RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 RSPO3Q9BXY4 272 aaPredicted RBP11.73□□□□□ -0.53
DFFB-202ENST00000339350 OR51B6Q9H340 312 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 KLHL1Q9NR64 748 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 PPP4R1LQ9P1A2 415 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 PLEKHA6Q9Y2H5 1048 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 TRANK1O15050 2925 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 MID1O15344 667 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 BCHEP06276 602 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 PPP3CBP16298 524 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 GALNSP34059 522 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 EPHA4P54764 986 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 SNRPD1P62314 119 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 DCDP81605 110 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 ELAVL2Q12926 359 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 HTR4Q13639 388 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 TMEM255AQ5JRV8 349 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ARMC6Q6NXE6 501 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 RABEPKQ7Z6M1 372 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 COMTD1Q86VU5 262 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 MEIOBQ8N635 442 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 POMGNT2Q8NAT1 580 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 PPCDCQ96CD2 204 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ATF6BQ99941 703 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 METTL1Q9UBP6 276 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 SNX11Q9Y5W9 270 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 PRR23D1E9PI22 279 aaPredicted RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 TLR4O00206 839 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 SMPD2O60906 423 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 BPNT1O95861 308 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 PRR23D2P0DMB1 279 aaPredicted RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 ELK1P19419 428 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ANXA7P20073 488 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 GABRR2P28476 465 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 XCR1P46094 333 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 RPS25P62851 125 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 SLBPQ14493 270 aaKnown RBP eCLIP11.72□□□□□ -0.53
DFFB-202ENST00000339350 KRT33BQ14525 404 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 TRAM1Q15629 374 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 C22orf39Q6P5X5 142 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ZNF783Q6ZMS7 281 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 ZNF614Q8N883 585 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 C2orf15Q8WU43 125 aaKnown RBP11.72□□□□□ -0.53
DFFB-202ENST00000339350 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
DFFB-202ENST00000339350 POP5Q969H6 163 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms