RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PPP4R1LQ9P1A2 415 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 BLACEA4D250 179 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 OR2T1O43869 369 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 IL1AP01583 271 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TMPRSS12Q86WS5 348 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GDPD1Q8N9F7 314 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 DIO2Q92813 273 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 NKD1Q969G9 470 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLAMF7Q9NQ25 335 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TRHRP34981 398 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 KIR2DL1P43626 348 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SIT1Q9Y3P8 196 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 BRCA1P38398 1863 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 RGS9O75916 674 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 H2BFMP0C1H6 154 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM92Q6UXU6 159 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 CNOT9Q92600 299 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLC52A3Q9NQ40 469 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ASB4Q9Y574 426 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 A0A0A6YYD5 115 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TLCD2A6NGC4 264 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 HBQ1P09105 142 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 HSD11B2P80365 405 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SNTB2Q13425 540 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 PARP16Q8N5Y8 322 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GRPEL2Q8TAA5 225 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 OR10A5Q9H207 317 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF226Q9NYT6 803 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 NLKQ9UBE8 527 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SIPA1L1O43166 1804 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1B0GWA3 101 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 YKT6O15498 198 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 LRRTM2O43300 516 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TACR3P29371 465 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GRPRP30550 384 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 RIDAP52758 137 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TSPAN5P62079 268 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 HTR4Q13639 388 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ACSM5Q6NUN0 579 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SYT14Q8NB59 555 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF566Q969W8 418 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 NTNG1Q9Y2I2 539 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 CKAP5Q14008 2032 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 RALGAPA2Q2PPJ7 1873 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 VSTM2BA6NLU5 285 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF793Q6ZN11 406 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 OR13C2Q8NGS9 318 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CHIAQ9BZP6 476 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 DIMT1Q9UNQ2 313 aaKnown RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 KCNE3Q9Y6H6 103 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 SOCS6O14544 535 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 HSD11B1P28845 292 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ADAM8P78325 824 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 MSLNLQ96KJ4 702 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 DUSP23Q9BVJ7 150 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 LRRN3E7EW58 273 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 IGFBP1P08833 259 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 RELAQ04206 551 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 GLT8D1Q68CQ7 371 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 DUSP19Q8WTR2 217 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ITPKCQ96DU7 683 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 LRRN3Q9H3W5 708 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ATP13A2Q9NQ11 1180 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 GREB1LQ9C091 1923 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 IQCMA0A1B0GVH7 501 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 SERINC4A6NH21 518 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 EEF1E1O43324 174 aaKnown RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 MAOAP21397 527 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CD97P48960 835 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 BTBD16Q32M84 506 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 PMM1Q92871 262 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF582Q96NG8 517 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 RHNO1Q9BSD3 238 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 GABARAPL3Q9BY60 117 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CCDC59Q9P031 241 aaKnown RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF264O43296 627 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 F13BP05160 661 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF20P17024 532 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZFP36L2P47974 494 aaKnown RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 MAPK14Q16539 360 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 C1orf94Q6P1W5 598 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF613Q6PF04 617 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 UPB1Q9UBR1 384 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CENPBD1B2RD01 187 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 K7EQS6 105 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 HCRTR1O43613 425 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 PTTG1O95997 202 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CHRM4P08173 479 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 S1PR1P21453 382 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 UGT2B10P36537 528 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ADGRF3Q8IZF5 1079 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 NANOGP1Q8N7R0 232 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 NXPE2Q96DL1 559 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 KLHL15Q96M94 604 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 CNN2Q99439 309 aaKnown RBP5.84□□□□□ -1.47
PRKDC-202ENST00000338368 STACQ99469 402 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 NRTNQ99748 197 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 UBQLN3Q9H347 655 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 RAB9BQ9NP90 201 aa5.84□□□□□ -1.47
PRKDC-202ENST00000338368 ASB6Q9NWX5 421 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms