RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 A0A0G2JNG1 304 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 FAM86C2PA6NEL3 165 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 KIR2DS3K7RE56 304 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 RNF13O43567 381 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 SLC35E2P0CK97 266 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 SHC1P29353 583 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 CTBP2P56545 445 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 OR12D2P58182 307 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 KIR2DS5Q14953 304 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 EXOSC6Q5RKV6 272 aaKnown RBP17.46■□□□□ 0.39
RFTN1-201ENST00000334133 KIAA0895LQ68EN5 471 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 SSX6Q7RTT6 188 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 C19orf47Q8N9M1 422 aaKnown RBP17.46■□□□□ 0.39
RFTN1-201ENST00000334133 C17orf47Q8NEP4 570 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 OR4C3Q8NH37 302 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 OR4C6Q8NH72 309 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 RELTQ969Z4 430 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 BABAM2Q9NXR7 383 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 J3QRE1 110 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 GTPBP1O00178 669 aaKnown RBP17.46■□□□□ 0.38
RFTN1-201ENST00000334133 NKX2-2O95096 273 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 RCBTB2O95199 551 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 OR10A3P58181 314 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.38
RFTN1-201ENST00000334133 GARNL3Q5VVW2 1013 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 XKRXQ6PP77 449 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 KIRREL2Q6UWL6 708 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 NPSR1Q6W5P4 371 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 UBQLNLQ8IYU4 475 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 SMRP1Q8NCR6 262 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 OR52N1Q8NH53 320 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 ZMYND19Q96E35 227 aaPredicted RBP17.46■□□□□ 0.38
RFTN1-201ENST00000334133 C4orf36Q96KX1 117 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 ISYNA1Q9NPH2 558 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 B3GAT2Q9NPZ5 323 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 DNAJB12Q9NXW2 375 aaKnown RBP17.46■□□□□ 0.38
RFTN1-201ENST00000334133 POMT2Q9UKY4 750 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 ERVK-19Q9WJR5 959 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 ADAM18Q9Y3Q7 739 aa17.46■□□□□ 0.38
RFTN1-201ENST00000334133 PLA2G10O15496 165 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 IFNA16P05015 189 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 ACAA2P42765 397 aaKnown RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 SF3B4Q15427 424 aaKnown RBP eCLIP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 RAB43Q86YS6 212 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 TOR1AIP2Q8NFQ8 470 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 DNAJA4Q8WW22 397 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 AP3S1Q92572 193 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 MED18Q9BUE0 208 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 HOXD1Q9GZZ0 328 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 SEMA6CQ9H3T2 930 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 DDX28Q9NUL7 540 aaKnown RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 CLEC4AQ9UMR7 237 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 TMEM184BQ9Y519 407 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 PCDHGB2Q9Y5G2 931 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 MPDZO75970 2070 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 A0A0B4J2E0 115 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 A0A1B0GX12 115 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 FOXS1O43638 330 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 SYT9Q86SS6 491 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 GID4Q8IVV7 300 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 SLC7A5P1Q8MH63 180 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 Q8N402 240 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 OR52E2Q8NGJ4 325 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 OR5W2Q8NH69 310 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 MMABQ96EY8 250 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 FAM210AQ96ND0 272 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 ERMAPQ96PL5 475 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 CMC2Q9NRP2 79 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 WSB2Q9NYS7 404 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-201ENST00000334133 OR10H1Q9Y4A9 318 aa17.45■□□□□ 0.38
RFTN1-201ENST00000334133 RIIAD1A6NNX1 92 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 FAM25AB3EWG3 89 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 FAM25CB3EWG5 89 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 FAM25GB3EWG6 89 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 DRD5P21918 477 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 NAA10P41227 235 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 ZNHIT3Q15649 155 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 TMPRSS11FQ6ZWK6 438 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 RNF113BQ8IZP6 322 aaKnown RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 UBASH3BQ8TF42 649 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 YIPF2Q9BWQ6 316 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 KLHL1Q9NR64 748 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 CABIN1Q9Y6J0 2220 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 CACNA1CQ13936 2221 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 MEIOCA2RUB1 952 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 C4orf47A7E2U8 309 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 SLC2A2P11168 524 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 GFERP55789 205 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 OR5M3Q8NGP4 307 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 EFHD2Q96C19 240 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-201ENST00000334133 ZNF559Q9BR84 538 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 MCCC2Q9HCC0 563 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 ZMIZ1Q9ULJ6 1067 aa17.44■□□□□ 0.38
RFTN1-201ENST00000334133 CCDC182A6NF36 153 aa17.43■□□□□ 0.38
RFTN1-201ENST00000334133 A8MUA0 341 aa17.43■□□□□ 0.38
RFTN1-201ENST00000334133 SDC3O75056 442 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms