RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 TRIM36Q9NQ86 728 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 AK6Q9Y3D8 172 aaKnown RBP12.6□□□□□ -0.39
SRRM1-201ENST00000323848 TRAV6A0A075B6T7 132 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 TRBV2A0A0J9YWF9 115 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 TBX6O95947 436 aaPredicted RBP12.6□□□□□ -0.39
SRRM1-201ENST00000323848 CD27P26842 260 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 HOXD12P35452 270 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 ADH7P40394 386 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 SLC35D2Q76EJ3 337 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 AP3S1Q92572 193 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 MMP28Q9H239 520 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 ZNF222Q9UK12 451 aa12.6□□□□□ -0.39
SRRM1-201ENST00000323848 LOC100509620A0A075B734 347 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 MBTPS2O43462 519 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 GP1BBP13224 206 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 ZNF12P17014 697 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 CLDN12P56749 244 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 QPRTQ15274 297 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 C1orf94Q6P1W5 598 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 MZT2AQ6P582 158 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 MARCH3Q86UD3 253 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 CA13Q8N1Q1 262 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 APH1BQ8WW43 257 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 MMP27Q9H306 513 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TRPV4Q9HBA0 871 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 PRODH2Q9UF12 536 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TNFRSF10CO14798 259 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 IGHV4-34P06331 123 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 RACK1P63244 317 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TSPAN31Q12999 210 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TBCEQ15813 527 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 MEDAGQ5VYS4 303 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 G6PC3Q9BUM1 346 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 ZNF639Q9UID6 485 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 RNF215Q9Y6U7 377 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 GPX5O75715 221 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 KCNK2O95069 426 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 RORAP35398 523 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 RAB38P57729 211 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 SCN1BQ07699 218 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 BTBD16Q32M84 506 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 LYPD4Q6UWN0 246 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 DGAT2L6Q6ZPD8 337 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 DIO2Q92813 273 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 DAZLQ92904 295 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 BTBD2Q9BX70 525 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 ADAM30Q9UKF2 790 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 CDC42EP2O14613 210 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 GRK5P34947 590 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 CD97P48960 835 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 LYSMD4Q5XG99 296 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 LRFN4Q6PJG9 635 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 LINGO2Q7L985 606 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 OR13C5Q8NGS8 318 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 C17orf50Q8WW18 174 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 WDR34Q96EX3 536 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 PITHD1Q9GZP4 211 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 SLITRK2Q9H156 845 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 NXF5Q9H1B4 397 aaKnown RBP12.59□□□□□ -0.39
SRRM1-201ENST00000323848 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 HS3ST3A1Q9Y663 406 aa12.59□□□□□ -0.39
SRRM1-201ENST00000323848 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 POLR1CO15160 346 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-201ENST00000323848 MAS1P04201 325 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 MAKP20794 623 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 TNFSF8P32971 234 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 AFF3P51826 1226 aaKnown RBP12.58□□□□□ -0.4
SRRM1-201ENST00000323848 CTF1Q16619 201 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 ZNF425Q6IV72 752 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 CAMKMTQ7Z624 323 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 TMEM163Q8TC26 289 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 Q96M85 177 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 TAPBPLQ9BX59 468 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 MUTYHQ9UIF7 546 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 CDH10Q9Y6N8 788 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 PAHP00439 452 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 MT-ND5P03915 603 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 PRKCAP17252 672 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 CD79BP40259 229 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 OR2B6P58173 313 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 TUBA1BP68363 451 aa12.58□□□□□ -0.4
SRRM1-201ENST00000323848 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms