RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PRAMEF8Q5VWM4 474 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 PRAMEF7Q5VXH5 474 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 DMKNQ6E0U4 476 aaPredicted RBP16.59■□□□□ 0.25
PRKCB-202ENST00000321728 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
PRKCB-202ENST00000321728 FAM71CQ8NEG0 241 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 NUP43Q8NFH3 380 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 OR2L2Q8NH16 312 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 OR52I2Q8NH67 350 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 SMPDL3BQ92485 455 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 OR52A5Q9H2C5 316 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 ING1Q9UK53 422 aaPredicted RBP16.59■□□□□ 0.25
PRKCB-202ENST00000321728 HEATR5BQ9P2D3 2071 aa16.59■□□□□ 0.25
PRKCB-202ENST00000321728 TRAV1-2A0A0B4J238 106 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 CTDSPLO15194 276 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 MAGEB4O15481 346 aaPredicted RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 RP2O75695 350 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 SBK2P0C263 348 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 ANXA7P20073 488 aaKnown RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 NOS3P29474 1203 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 PRKAR1BP31321 381 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 PDX1P52945 283 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 CLDN2P57739 230 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 HLXQ14774 488 aaPredicted RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 GPR68Q15743 365 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 SERPINA12Q8IW75 414 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 CYB561A3Q8NBI2 242 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 OR10Z1Q8NGY1 313 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 BRIX1Q8TDN6 353 aaKnown RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 DERL3Q96Q80 235 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 KLHL31Q9H511 634 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 WASH6PQ9NQA3 447 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 NANSQ9NR45 359 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 SIDT1Q9NXL6 827 aaKnown RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 AKAP7Q9P0M2 348 aaPredicted RBP16.58■□□□□ 0.25
PRKCB-202ENST00000321728 FBXL2Q9UKC9 423 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 CA5BQ9Y2D0 317 aa16.58■□□□□ 0.25
PRKCB-202ENST00000321728 OBSL1O75147 1896 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 COL4A3Q01955 1670 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 TSPAN11A1L157 253 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 BHLHE40O14503 412 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 MTRF1O75570 445 aaKnown RBP16.58■□□□□ 0.24
PRKCB-202ENST00000321728 GYPBP06028 91 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 TYRP14679 529 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 FXYD6P3P58550 94 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 RAP2BP61225 183 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 DHODHQ02127 395 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 TP53I3Q53FA7 332 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 UBE2NLQ5JXB2 153 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 FAAP20Q6NZ36 180 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 NHLRC1Q6VVB1 395 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 GLDNQ6ZMI3 551 aaPredicted RBP16.58■□□□□ 0.24
PRKCB-202ENST00000321728 TEX19Q8NA77 164 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 HS6ST2Q96MM7 605 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 SLC46A2Q9BY10 475 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 MCCC2Q9HCC0 563 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 MED9Q9NWA0 146 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 CALML5Q9NZT1 146 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 KLK11Q9UBX7 282 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 ATG4BQ9Y4P1 393 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 PCYT1BQ9Y5K3 369 aaPredicted RBP16.58■□□□□ 0.24
PRKCB-202ENST00000321728 VCANP13611 3396 aa16.58■□□□□ 0.24
PRKCB-202ENST00000321728 TCF20Q9UGU0 1960 aaKnown RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 EMC8O43402 210 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 CREBL2O60519 120 aaPredicted RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ARL6IP5O75915 188 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ZIC2O95409 532 aaPredicted RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SERPINA3P01011 423 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ATP1B1P05026 303 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 S100A11P31949 105 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 TRA2BP62995 288 aaKnown RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SREBF2Q12772 1141 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 LHX8Q68G74 356 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 LRFN4Q6PJG9 635 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SSX6Q7RTT6 188 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SPICQ8N5J4 248 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 OR9A2Q8NGT5 310 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 PFN4Q8NHR9 129 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 LCORQ96JN0 433 aaPredicted RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ADGRL4Q9HBW9 690 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 FBXL4Q9UKA2 621 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 COPS3Q9UNS2 423 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 C17orf113A0A1B0GUU1 675 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 A0A1W2PR48 441 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ANXA2P2A6NMY6 339 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SUSD5O60279 629 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ECDO95905 644 aaPredicted RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 ASGR2P07307 311 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 MAKP20794 623 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 MAT2AP31153 395 aaKnown RBP16.57■□□□□ 0.24
PRKCB-202ENST00000321728 AP3S2P59780 193 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 FOXK2Q01167 660 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 OR6V1Q8N148 313 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 SCARB1Q8WTV0 552 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 C20orf141Q9NUB4 165 aa16.57■□□□□ 0.24
PRKCB-202ENST00000321728 LRIT2A6NDA9 550 aa16.56■□□□□ 0.24
PRKCB-202ENST00000321728 APOC3P02656 99 aa16.56■□□□□ 0.24
PRKCB-202ENST00000321728 IFNGR1P15260 489 aa16.56■□□□□ 0.24
PRKCB-202ENST00000321728 SYN1P17600 705 aa16.56■□□□□ 0.24
PRKCB-202ENST00000321728 HCCSP53701 268 aa16.56■□□□□ 0.24
PRKCB-202ENST00000321728 HES5Q5TA89 166 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms