RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 C6orf132Q5T0Z8 1188 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TMEM88Q6PEY1 159 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 FAM129CQ86XR2 697 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 RAD51AP1Q96B01 352 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PGLYRP3Q96LB9 341 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PINK1Q9BXM7 581 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SLC38A1Q9H2H9 487 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZCCHC4Q9H5U6 513 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 EVA1AQ9H8M9 152 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SPG21Q9NZD8 308 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ING1Q9UK53 422 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 UNC80Q8N2C7 3258 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CACNA1CQ13936 2221 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TRAV27A0A087WT01 109 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CENPVL1A0A0U1RR11 272 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ACOD1A6NK06 481 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SOX1O00570 391 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 NDUFA2O43678 99 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 LCMT2O60294 686 aaKnown RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CREBL2O60519 120 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SDC3O75056 442 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 HMGN1P05114 100 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SAGP10523 405 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF35P13682 527 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 BMP7P18075 431 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 STAT5AP42229 794 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TAS2R38P59533 333 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ERVK-25P63136 954 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PRKCZQ05513 592 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 LGALS3BPQ08380 585 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CAMK1Q14012 370 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 LTB4RQ15722 352 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 C11orf88Q6PI97 169 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 FCRLAQ7L513 359 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TPRA1Q86W33 373 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PDZD9Q8IXQ8 264 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SLC44A3Q8N4M1 653 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 VN1R2Q8NFZ6 395 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 OR52L1Q8NGH7 329 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 LRRC46Q96FV0 321 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 AHCYL2Q96HN2 611 aaKnown RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 LRIG1Q96JA1 1093 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CAMK1GQ96NX5 476 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 OR7D2Q96RA2 312 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TEAD3Q99594 435 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 AIF1LQ9BQI0 150 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CPEB1Q9BZB8 566 aaKnown RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 KLHL31Q9H511 634 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CAMK2AQ9UQM7 478 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CCL26Q9Y258 94 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CA5BQ9Y2D0 317 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF106Q9H2Y7 1883 aaKnown RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TET1Q8NFU7 2136 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 J3QRE1 110 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PLPP2O43688 288 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 RLN2P04090 185 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CTSLP07711 333 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GAAP10253 952 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PDX1P52945 283 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SEC61A1P61619 476 aaKnown RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GPNMBQ14956 572 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF793Q6ZN11 406 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GAREM2Q75VX8 874 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 UBE3DQ7Z6J8 389 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GID4Q8IVV7 300 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 OR13C2Q8NGS9 318 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 OR9A2Q8NGT5 310 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 OR1S1Q8NH92 325 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SCARB1Q8WTV0 552 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZDHHC1Q8WTX9 485 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SMPDL3BQ92485 455 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 KISS1RQ969F8 398 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 RGMAQ96B86 450 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZMYND19Q96E35 227 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 SLC38A3Q99624 504 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 C6orf106Q9H6K1 298 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TMEM138Q9NPI0 162 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 KLHL28Q9NXS3 571 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ATPIF1Q9UII2 106 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GMEB2Q9UKD1 530 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF175Q9Y473 711 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TP53BP1Q12888 1972 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 H0YC42 278 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 STX11O75558 287 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ZIC2O95409 532 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 TGM6O95932 706 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 RPLP2P05387 115 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 IL9P15248 144 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 MAKP20794 623 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 AKR1C2P52895 323 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 FXYD6P3P58550 94 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 RPS15P62841 145 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 SHC2P98077 582 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF85Q03923 595 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms