RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FOXK2Q01167 660 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.42
SKA3-202ENST00000314759 TRAM1Q15629 374 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 SFTPA1Q8IWL2 248 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 OR7G2Q8NG99 324 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 OR5J2Q8NH18 312 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 THAP4Q8WY91 577 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 CXorf58Q96LI9 332 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 DDOQ99489 341 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 GSDMCQ9BYG8 508 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.42
SKA3-202ENST00000314759 KRCC1Q9NPI7 259 aaPredicted RBP12.46□□□□□ -0.42
SKA3-202ENST00000314759 INPP5EQ9NRR6 644 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 LYARQ9NX58 379 aaKnown RBP12.46□□□□□ -0.42
SKA3-202ENST00000314759 SCP2D1Q9UJQ7 156 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 FBXL4Q9UKA2 621 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 NPFFR2Q9Y5X5 522 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 ZNF780BQ9Y6R6 833 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 SNRNP200O75643 2136 aaKnown RBP12.46□□□□□ -0.42
SKA3-202ENST00000314759 C5orf42Q9H799 3197 aa12.46□□□□□ -0.42
SKA3-202ENST00000314759 A0A1B0GVI7 797 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 TRABD2BA6NFA1 517 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 HIDE1A8MVS5 230 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 HYAL3O43820 417 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 TPPPO94811 219 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 FCER2P06734 321 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 SBK2P0C263 348 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 HTR2AP28223 471 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 DMKNQ6E0U4 476 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 MFSD12Q6NUT3 480 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 WFIKKN2Q8TEU8 576 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 ING5Q8WYH8 240 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 ORAI3Q9BRQ5 295 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 ZNF436Q9C0F3 470 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 ADGRL4Q9HBW9 690 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 CMC2Q9NRP2 79 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 APOBEC3BQ9UH17 382 aaKnown RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 WDR45Q9Y484 360 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 EDDM13A0A1B0GTR0 161 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 A0A1W2PRG6 482 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 SLC22A31A6NKX4 558 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 POM121CA8CG34 1229 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 PRR23D1E9PI22 279 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 PRR23D2P0DMB1 279 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 PYCR1P32322 319 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 P2RY2P41231 377 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 RAG2P55895 527 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 HSD17B12Q53GQ0 312 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 Q6ZTK2 550 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 RAB42Q8N4Z0 105 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 RPLP0P6Q8NHW5 317 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 COL26A1Q96A83 441 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 WDR89Q96FK6 387 aaPredicted RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 CLDND1Q9NY35 253 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 MRPL15Q9P015 296 aaKnown RBP12.45□□□□□ -0.42
SKA3-202ENST00000314759 A0A0C4DFX4 3053 aa12.45□□□□□ -0.42
SKA3-202ENST00000314759 DUXAA6NLW8 204 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 UGT2B7P16662 529 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 LCN1P31025 176 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 BLVRAP53004 296 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TAS2R43P59537 309 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 EEF1A1P68104 462 aaKnown RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 PITPNAQ00169 270 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 KLF9Q13886 244 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 CMIPQ8IY22 773 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SLC44A3Q8N4M1 653 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TEX19Q8NA77 164 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SFXN2Q96NB2 322 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 IFT27Q9BW83 186 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SPRTNQ9H040 489 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ZDHHC4Q9NPG8 344 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 BRD7Q9NPI1 651 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 OR1A2Q9Y585 309 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TRAPPC13A5PLN9 417 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 MFSD2BA6NFX1 497 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 IGLON5A6NGN9 336 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 LRRN3E7EW58 273 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 EPXP11678 715 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ZP3P21754 424 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 NRG3P56975 720 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 TSPAN5P62079 268 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 SIM1P81133 766 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 OPCMLQ14982 345 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 GPR68Q15743 365 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 MAPK14Q16539 360 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
SKA3-202ENST00000314759 ANKRD33Q7Z3H0 272 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 FGD2Q7Z6J4 655 aa12.44□□□□□ -0.42
SKA3-202ENST00000314759 ASPGQ86U10 573 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms