RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LACC1Q8IV20 430 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 P3H2Q8IVL5 708 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ZZZ3Q8IYH5 903 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MBD3L2Q8NHZ7 208 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ZPLD1Q8TCW7 415 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 KAT8Q9H7Z6 458 aaKnown RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 COQ3Q9NZJ6 369 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF814B7Z6K7 855 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 DNAJA2O60884 412 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 TNFSF13O75888 250 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 FUT4P22083 530 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MSX1P28360 303 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 CHRNB4P30926 498 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 SCARB2Q14108 478 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 SGCBQ16585 318 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 DUSP7Q16829 419 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 PLEKHM3Q6ZWE6 761 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ADGRG3Q86Y34 549 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MISPQ8IVT2 679 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 PM20D2Q8IYS1 436 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 TOR1AIP2Q8NFQ8 470 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 OR4D11Q8NGI4 311 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ABHD3Q8WU67 409 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 FAM53CQ9NYF3 392 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 CAPN7Q9Y6W3 813 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 CD8B2A6NJW9 211 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 SLC22A20A6NK97 555 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 EIF4E2O60573 245 aaKnown RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 SHOX2O60902 331 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 PABPC4LP0CB38 370 aaKnown RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 FOXD4Q12950 439 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CBFBQ13951 182 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF311Q5JNZ3 666 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 TMEM211Q6ICI0 200 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 C22orf34Q6ZV56 151 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CPLX4Q7Z7G2 160 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CADM2Q8N3J6 435 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 GPR32P1Q8NGA4 272 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 OSTF1Q92882 214 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 ZBTB8AQ96BR9 441 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 MYLK2Q9H1R3 596 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 EEF1E1-BLOC1S5C9J1V9 151 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 EEF1E1O43324 174 aaKnown RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 IL2RAP01589 272 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 DBIP07108 87 aaKnown RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 TMIGD3P0DMS9 266 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 COX4I1P13073 169 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 SLC6A2P23975 617 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 HTR2AP28223 471 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 TACR3P29371 465 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 KIR2DL2P43627 348 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 KRTAP10-9P60411 292 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 RAC1P63000 192 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 ART3Q13508 389 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CYLC2Q14093 348 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CYP51A1Q16850 503 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 TRMT5Q32P41 509 aaKnown RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 RIPPLY2Q5TAB7 128 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 HBMQ6B0K9 141 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 BTLAQ7Z6A9 289 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 PEX5LQ8IYB4 626 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CNEP1R1Q8N9A8 125 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 KLHL15Q96M94 604 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 OR5B2Q96R09 309 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 OPN3Q9H1Y3 402 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-201ENST00000311943 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 OSGIN1Q9UJX0 560 aa10.79□□□□□ -0.68
SCFD1-201ENST00000311943 A0A0G2JPF8 293 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 TMEM72A0PK05 275 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 HNRNPCL2B2RXH8 293 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 HNRNPCL3B7ZW38 293 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 M0QX08 132 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 M0R3H8 397 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 ADAMDEC1O15204 470 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 HNRNPCL1O60812 293 aaKnown RBP10.78□□□□□ -0.68
SCFD1-201ENST00000311943 HNRNPCL4P0DMR1 293 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 TIMP3P35625 211 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 EPS8Q12929 822 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 FADDQ13158 208 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 PIGWQ7Z7B1 504 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 MEIOBQ8N635 442 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 METTL25Q8N6Q8 603 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF583Q96ND8 569 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 SLC35A3Q9Y2D2 325 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 GPC6Q9Y625 555 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-201ENST00000311943 AP4B1Q9Y6B7 739 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 LRBAP50851 2863 aa10.78□□□□□ -0.68
SCFD1-201ENST00000311943 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-201ENST00000311943 MPDZO75970 2070 aa10.77□□□□□ -0.68
SCFD1-201ENST00000311943 A0A087WZY1 265 aa10.77□□□□□ -0.68
SCFD1-201ENST00000311943 C7orf72A4D263 438 aa10.77□□□□□ -0.68
SCFD1-201ENST00000311943 EVPLLA8MZ36 301 aa10.77□□□□□ -0.68
SCFD1-201ENST00000311943 TMEM229AB2RXF0 380 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms