RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 KNTC1P50748 2209 aa6.37□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF264O43296 627 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 KLF4O43474 513 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CHP2O43745 196 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 SCO2O43819 266 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 SOX14O95416 240 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ANGPTL1O95841 491 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 FBXO45P0C2W1 286 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CHMP24386 653 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 MST1P26927 711 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ELK4P28324 431 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 IFNA8P32881 189 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 GSSP48637 474 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ISL1P61371 349 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CD47Q08722 323 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 EFR3AQ14156 821 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 BICRALQ6AI39 1079 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 FCRLBQ6BAA4 426 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CD300LDQ6UXZ3 194 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 MBOAT2Q6ZWT7 520 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 MRGPREQ86SM8 312 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 NRMQ8IXM6 262 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF440Q8IYI8 595 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 C8orf59Q8N0T1 100 aaPredicted RBP6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CADM2Q8N3J6 435 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 LINC00471Q8N535 108 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 TMCO5AQ8N6Q1 288 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 RNF138Q8WVD3 245 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ADAMTS14Q8WXS8 1223 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 NKD1Q969G9 470 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 C3orf49Q96BT1 292 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 SH3YL1Q96HL8 342 aaPredicted RBP6.36□□□□□ -1.39
PTCD2-201ENST00000308077 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
PTCD2-201ENST00000308077 HRASLS5Q96KN8 279 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 GPR87Q9BY21 358 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 TBL1XR1Q9BZK7 514 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 TRIM2Q9C040 744 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 LAT2Q9GZY6 243 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 DSN1Q9H410 356 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 ASCL3Q9NQ33 180 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 CNIH4Q9P003 139 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 AASSQ9UDR5 926 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 IL17BQ9UHF5 180 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 HRH3Q9Y5N1 445 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 GMPPBQ9Y5P6 360 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 EML6Q6ZMW3 1958 aa6.36□□□□□ -1.39
PTCD2-201ENST00000308077 TLN1Q9Y490 2541 aaKnown RBP6.36□□□□□ -1.39
PTCD2-201ENST00000308077 C2orf72A6NCS6 295 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 H3BNH8 94 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GTPBP1O00178 669 aaKnown RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CDC42EP2O14613 210 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 NDUFB5O43674 189 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GMFGO60234 142 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ITGA10O75578 1167 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 HPP00738 406 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 LINGO3P0C6S8 592 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 OSMP13725 252 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 NAGAP17050 411 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GGT2P36268 569 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 PTGDSP41222 190 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 SOX3P41225 446 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GPR4P46093 362 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CCR4P51679 360 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CRISP1P54107 249 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GAS1P54826 345 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 IL18R1Q13478 541 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ATP1A4Q13733 1029 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 PTGES3Q15185 160 aaKnown RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TOMM34Q15785 309 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 NTRK2Q16620 822 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 MEP1AQ16819 746 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ALG10BQ5I7T1 473 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM236Q5W0B7 351 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 LINC00114Q6XXX2 140 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TMPRSS7Q7RTY8 843 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF786Q8N393 782 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TOR1AIP2Q8NFQ8 470 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 OR10G3Q8NGC4 313 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 PIGXQ8TBF5 258 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 RNF217Q8TC41 542 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 SLC22A8Q8TCC7 542 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GNPDA2Q8TDQ7 276 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ADAMTS17Q8TE56 1095 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TMEM239Q8WW34 195 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 UBE2FQ969M7 185 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF426Q9BUY5 554 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 PLA2G12AQ9BZM1 189 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF696Q9H7X3 374 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GALNT9Q9HCQ5 603 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ATP13A2Q9NQ11 1180 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 MEPEQ9NQ76 525 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 C20orf141Q9NUB4 165 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 P4HTMQ9NXG6 502 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ICAM5Q9UMF0 924 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ZAR1LA6NP61 321 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms