RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CLDN2P57739 230 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 LEXMQ3ZCV2 418 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 OR2G6Q5TZ20 316 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 PRAMEF9Q5VWM5 478 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 PODNL1Q6PEZ8 512 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ABHD12BQ7Z5M8 362 aaPredicted RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 TMEM135Q86UB9 458 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 MS4A15Q8N5U1 240 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 SIMC1Q8NDZ2 872 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 GGHQ92820 318 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 NEIL2Q969S2 332 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 CHFRQ96EP1 664 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 TUBB1Q9H4B7 451 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 EHFQ9NZC4 300 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 TP53TG5Q9Y2B4 290 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 GABRR3A8MPY1 467 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 RFXAPO00287 272 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 GPX3P22352 226 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 EBPQ15125 230 aaKnown RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ZNF440Q8IYI8 595 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 FOXRED1Q96CU9 486 aaPredicted RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 USB1Q9BQ65 265 aaKnown RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 FBXL2Q9UKC9 423 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 RCE1Q9Y256 329 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 PCDHGA5Q9Y5G8 931 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ZNF780AO75290 641 aaPredicted RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 RPS25P62851 125 aaKnown RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 TAP2Q03519 686 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 RTP2Q5QGT7 225 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 NIPAL3Q6P499 406 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 FAM57BQ71RH2 274 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 BRIX1Q8TDN6 353 aaKnown RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 SURF4O15260 269 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 NDUFB2O95178 105 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 SYPP08247 313 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 UBL4AP11441 157 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 EEF1A1P68104 462 aaKnown RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ARHGAP11BQ3KRB8 267 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 TMEFF1Q8IYR6 380 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ADGRF3Q8IZF5 1079 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 LIPHQ8WWY8 451 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 VAPAQ9P0L0 249 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ANKMY1Q9P2S6 941 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ASH2LQ9UBL3 628 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 MYH7P12883 1935 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ATG12O94817 140 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 AVPI1Q5T686 147 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 MANEALQ5VSG8 457 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 BAGE3Q86Y29 109 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 BAGE2Q86Y30 109 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ZNF610Q8N9Z0 462 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ZNF775Q96BV0 537 aaPredicted RBP15.13■□□□□ 0.01
SSRP1-202ENST00000293880 ELP4Q96EB1 424 aa15.13■□□□□ 0.01
SSRP1-202ENST00000293880 A0A0A6YYC8 382 aaPredicted RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 A0A1W2PS29 197 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 I3L1I5 382 aaPredicted RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 GABRPO00591 440 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 ARG2P78540 354 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SULF2Q8IWU5 870 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 FAM160A2Q8N612 972 aaPredicted RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 PIGCQ92535 297 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SOCS7O14512 581 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 T-ENOLP0DO92 83 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 IL4RP24394 825 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 FJX1Q86VR8 437 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 ZNF75AQ96N20 296 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 CNTNAP3Q9BZ76 1288 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 ACPTQ9BZG2 426 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 METTL17Q9H7H0 456 aaPredicted RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 GMPR2Q9P2T1 348 aaKnown RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SIX6O95475 246 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 PTBP3O95758 552 aaKnown RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 CDK4P11802 303 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 NME2P22392 152 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 TAS2R31P59538 309 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 PRPS1P60891 318 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 C1orf220Q5T0J3 134 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 KIAA0895LQ68EN5 471 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 UMODL1-AS1Q8N2C9 162 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 MIB2Q96AX9 1013 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 RTP3Q9BQQ7 232 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 FAM103A1Q9BTL3 118 aaKnown RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 TPPP3Q9BW30 176 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 ADAM19Q9H013 955 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 TATDN3Q17R31 274 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 LAX1Q8IWV1 398 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 OR4K15Q8NH41 348 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SIAEQ9HAT2 523 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 NPC1O15118 1278 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 TNFSF8P32971 234 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 EPHA4P54764 986 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 RPL23AP62750 156 aaKnown RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SSX7Q7RTT5 188 aa15.12■□□□□ 0.01
SSRP1-202ENST00000293880 BCDIN3DQ7Z5W3 292 aaKnown RBP15.12■□□□□ 0.01
SSRP1-202ENST00000293880 SEC22AQ96IW7 307 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms