RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CBFA2T3O75081 653 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 PTP4A3O75365 173 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 RCBTB2O95199 551 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 GYPBP06028 91 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 HSD11B2P80365 405 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 CRTC2Q53ET0 693 aaPredicted RBP17.74■□□□□ 0.43
BRAF-201ENST00000288602 MED25Q71SY5 747 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 SLC22A16Q86VW1 577 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 CAMKK1Q8N5S9 505 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 EXOGQ9Y2C4 368 aaKnown RBP17.74■□□□□ 0.43
BRAF-201ENST00000288602 SF3B6Q9Y3B4 125 aaKnown RBP17.74■□□□□ 0.43
BRAF-201ENST00000288602 PEX16Q9Y5Y5 336 aa17.74■□□□□ 0.43
BRAF-201ENST00000288602 BLACEA4D250 179 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 K7ESF4 209 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 MRPL3P09001 348 aaKnown RBP17.73■□□□□ 0.43
BRAF-201ENST00000288602 CXCL12P48061 93 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 CTBP2P56545 445 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 RPS7P62081 194 aaKnown RBP17.73■□□□□ 0.43
BRAF-201ENST00000288602 FABP5Q01469 135 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 DSG2Q14126 1118 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 GXYLT1Q4G148 440 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 NIPAL3Q6P499 406 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 PRR22Q8IZ63 422 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 LSMEM1Q8N8F7 131 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 SLC37A3Q8NCC5 494 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 CDX2Q99626 313 aaPredicted RBP17.73■□□□□ 0.43
BRAF-201ENST00000288602 TMED9Q9BVK6 235 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 TRIM2Q9C040 744 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 TMEM165Q9HC07 324 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 TBCCD1Q9NVR7 557 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 RPS6KB2Q9UBS0 482 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 CDC14CA4D256 554 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 SERINC4A6NH21 518 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 GMFGO60234 142 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 UPK1BO75841 260 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 GIMD1P0DJR0 217 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 EPHA4P54764 986 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 CBX3Q13185 183 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 FHL1Q13642 323 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 PLK5Q496M5 336 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 ZNF362Q5T0B9 420 aaPredicted RBP17.73■□□□□ 0.43
BRAF-201ENST00000288602 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
BRAF-201ENST00000288602 STEAP3Q658P3 488 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 GDPGP1Q6ZNW5 385 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 KLBQ86Z14 1044 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 LYSMD2Q8IV50 215 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 TMEM99Q8N816 258 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 UFD1Q92890 307 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 ZNF426Q9BUY5 554 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 NRSN2Q9GZP1 204 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 RAB33BQ9H082 229 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 TMEM5Q9Y2B1 443 aa17.73■□□□□ 0.43
BRAF-201ENST00000288602 MSL3P1P0C860 447 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 CELP19835 753 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 PAICSP22234 425 aaKnown RBP17.72■□□□□ 0.43
BRAF-201ENST00000288602 TGM1P22735 817 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 SLC37A1P57057 533 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 TPBGQ13641 420 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 CD226Q15762 336 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 MEPCEQ7L2J0 689 aaKnown RBP17.72■□□□□ 0.43
BRAF-201ENST00000288602 DNASE2BQ8WZ79 361 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 NXF5Q9H1B4 397 aaKnown RBP17.72■□□□□ 0.43
BRAF-201ENST00000288602 MCCC2Q9HCC0 563 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 CLCA3PQ9Y6N3 262 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 C12orf71A8MTZ7 269 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 TAF4O00268 1085 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
BRAF-201ENST00000288602 SOX30O94993 753 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 SDC2P34741 201 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 RORCP51449 518 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 CAV3P56539 151 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 ULK3Q6PHR2 472 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 ZNF550Q7Z398 422 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 TMEM151BQ8IW70 566 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 GAL3ST4Q96RP7 486 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 NUDT22Q9BRQ3 303 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 HDHD5Q9BXW7 423 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 SMURF1Q9HCE7 757 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 CMC2Q9NRP2 79 aa17.72■□□□□ 0.43
BRAF-201ENST00000288602 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.43
BRAF-201ENST00000288602 OIP5O43482 229 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 DUX1O43812 170 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 HCN1O60741 890 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 IGHA1P01876 353 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.43
BRAF-201ENST00000288602 TNFSF8P32971 234 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 BCAP31P51572 246 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 CCR4P51679 360 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 CRMP1Q14194 572 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 PLEKHG7Q6ZR37 379 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 GHDCQ8N2G8 530 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 KISS1RQ969F8 398 aaPredicted RBP17.71■□□□□ 0.43
BRAF-201ENST00000288602 CEP19Q96LK0 163 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 FSCN3Q9NQT6 498 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 GMEB2Q9UKD1 530 aa17.71■□□□□ 0.43
BRAF-201ENST00000288602 HNRNPA0Q13151 305 aaKnown RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms