RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SLC41A3Q96GZ6 507 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 C12orf66Q96MD2 445 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 SFXN2Q96NB2 322 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 PELOQ9BRX2 385 aaKnown RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 C1QTNF2Q9BXJ5 285 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ZCCHC4Q9H5U6 513 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 METTL17Q9H7H0 456 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 MTHFD2LQ9H903 347 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 SSUH2Q9Y2M2 353 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ZNF175Q9Y473 711 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 SLC22A23A1A5C7 686 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 C1QTNF3-AMACRE9PGA6 284 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TMEM127O75204 238 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TOXO94900 526 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZNF16P17020 682 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 RAB3AP20336 220 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 BLVRAP53004 296 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 DUSP2Q05923 314 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SLC30A6Q6NXT4 461 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 CDC73Q6P1J9 531 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 BAIAP2L2Q6UXY1 529 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MEPCEQ7L2J0 689 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 CXXC5Q7LFL8 322 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 KLBQ86Z14 1044 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SAMD14Q8IZD0 417 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZNF687Q8N1G0 1237 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SIRT6Q8N6T7 355 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MRPL43Q8N983 215 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 MFSD9Q8NBP5 474 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 NUP43Q8NFH3 380 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 BEST4Q8NFU0 473 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 YIPF5Q969M3 257 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 ARMC5Q96C12 935 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 CMTM3Q96MX0 182 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 C1QTNF6Q9BXI9 259 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TRIM36Q9NQ86 728 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 HINT3Q9NQE9 182 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 PFDN2Q9UHV9 154 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 RASD1Q9Y272 281 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZNF443Q9Y2A4 671 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 ATG4BQ9Y4P1 393 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 KCNE3Q9Y6H6 103 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TBC1D3KA0A087X1G2 549 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TBC1D3BA6NDS4 549 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TBC1D3FA6NER0 549 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 EPOPA6NHQ4 379 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 C4orf51C9J302 202 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 PRRT4C9JH25 899 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZNF593O00488 134 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 PGRMC2O15173 223 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 FZD7O75084 574 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 CD1AP06126 327 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 PROS1P07225 676 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 P2RY2P41231 377 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MMP15P51511 669 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 PITPNAQ00169 270 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 DHODHQ02127 395 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 DUSP8Q13202 625 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 CAMK1Q14012 370 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MLF2Q15773 248 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 ARHGAP11BQ3KRB8 267 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 FNDC3BQ53EP0 1204 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 TCTE1Q5JU00 501 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 PIP5KL1Q5T9C9 394 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SLC22A10Q63ZE4 541 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TBC1D3GQ6DHY5 549 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 FRRS1Q6ZNA5 592 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 VRK2Q86Y07 508 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 LNX2Q8N448 690 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 KISS1RQ969F8 398 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MS4A4EQ96PG1 132 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZNF416Q9BWM5 594 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 UBQLN3Q9H347 655 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 KLHL31Q9H511 634 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 BRD7Q9NPI1 651 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 HAO2Q9NYQ3 351 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SPATA2Q9UM82 520 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 NPFFR2Q9Y5X5 522 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 A0A0G2JK05 382 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 A0A1B0GVC2 190 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 A6NIN4 97 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 CPSF4LA6NMK7 179 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 BHLHE40O14503 412 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 RNGTTO60942 597 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 CD3GP09693 182 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 EPCAMP16422 314 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SELENOPP49908 381 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 CCR6P51684 374 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 RGS8P57771 180 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 EEF1A1P68104 462 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SEZ6L2Q6UXD5 910 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 NRROSQ86YC3 692 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 NKAIN4Q8IVV8 208 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SLITRK4Q8IW52 837 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 BMPERQ8N8U9 685 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TRMT10AQ8TBZ6 339 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms