RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 UBL4AP11441 157 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 RAB38P57729 211 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 TMEM201Q5SNT2 666 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 CD300LDQ6UXZ3 194 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 PEX11GQ96HA9 241 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OPALINQ96PE5 141 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 SNX18Q96RF0 628 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 G6PC3Q9BUM1 346 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 GTF2A1LQ9UNN4 478 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 TOR1AO14656 332 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 HIST1H2ABP04908 130 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 CEBPGP53567 150 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 UBXN2BQ14CS0 331 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR2G6Q5TZ20 316 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 ZNF770Q6IQ21 691 aaPredicted RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 ZNF836Q6ZNA1 936 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 HIST3H2AQ7L7L0 130 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR52R1Q8NGF1 315 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR9A4Q8NGU2 314 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 BAHD1Q8TBE0 780 aaPredicted RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 HIST1H2ACQ93077 130 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 MNTQ99583 582 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 NDC1Q9BTX1 674 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 HDHD5Q9BXW7 423 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR52D1Q9H346 318 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 ERVMER34-1Q9H9K5 563 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 DUSP22Q9NRW4 184 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 MTCL1Q9Y4B5 1905 aaKnown RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 A0A1W2PQ09 198 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 CIB4A0PJX0 185 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 TMEM229AB2RXF0 380 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 DISC1C4P0D8 188 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 GPX5O75715 221 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 NUDT14O95848 222 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 ZNF791Q3KP31 576 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 TMEM184AQ6ZMB5 413 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 RNF113BQ8IZP6 322 aaKnown RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 DEFB119Q8N690 84 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 ADAMTS18Q8TE60 1221 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 TMEM255BQ8WV15 326 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 TSNAXQ99598 290 aaKnown RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 C6orf106Q9H6K1 298 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 A0A0A6YYC8 382 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 SLC22A31A6NKX4 558 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 I3L1I5 382 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 EML2O95834 649 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 THBS1P07996 1170 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 GABRB1P18505 474 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 ATXN7L3Q14CW9 347 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 OLFML2AQ68BL7 652 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 LYSMD2Q8IV50 215 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 NOTCH4Q99466 2003 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 SARGQ9BW04 601 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 CCDC88CQ9P219 2028 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 ZNF670-ZNF695F2Z2N8 137 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 PVALBP20472 110 aaPredicted RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 TGM4P49221 684 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 ARL9Q6T311 187 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 C17orf107Q6ZR85 190 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 NEDD4LQ96PU5 975 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 TAS2R3Q9NYW6 316 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 TESQ9UGI8 421 aaKnown RBP15.13■□□□□ 0.01
CTCF-201ENST00000264010 ACAD8Q9UKU7 415 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 SLC6A14Q9UN76 642 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 DENND4CQ5VZ89 1909 aa15.13■□□□□ 0.01
CTCF-201ENST00000264010 A0A075B6Q4 140 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 SLC9B1P1A6NJY1 282 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 CTSVO60911 334 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 IL1AP01583 271 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 MT-ND5P03915 603 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 CBR1P16152 277 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 TNFSF8P32971 234 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 MAP2K3P46734 347 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 KLBQ86Z14 1044 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 MFSD4AQ8N468 514 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 NEIL3Q8TAT5 605 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 EVA1AQ9H8M9 152 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PRODH2Q9UF12 536 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 CES1P1Q9UKY3 287 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 NTNG1Q9Y2I2 539 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PLXNB3Q9ULL4 1909 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 TCF20Q9UGU0 1960 aaKnown RBP15.12■□□□□ 0.01
CTCF-201ENST00000264010 SNTA1Q13424 505 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 IRF3Q14653 427 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 BEST4Q8NFU0 473 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 OR5T3Q8NGG3 340 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 TNFAIP8L1Q8WVP5 186 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 BPIFA2Q96DR5 249 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 STACQ99469 402 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PLXNA2O75051 1894 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 A0A1B0GVC2 190 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 A6NIN4 97 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PRICKLE3O43900 615 aaPredicted RBP15.12■□□□□ 0.01
CTCF-201ENST00000264010 FGF17O60258 216 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 ZNF217O75362 1048 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 GRK6P43250 576 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 DUSP8Q13202 625 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 IDNKQ5T6J7 187 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms