RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 A0A0G2JMM0 328 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 A0A1W2PPB8 328 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 A0A1W2PRS3 328 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 KIR3DP1A8MWS1 328 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TIPRLO75663 272 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ANGPTL1O95841 491 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 CSTAP01040 98 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 CASP3P42574 277 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 CYB561P49447 251 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TBCELQ5QJ74 424 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 OR6T1Q8NGN1 323 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 CCM2LQ9NUG4 571 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 DNAJB12Q9NXW2 375 aaKnown RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 LRFN1Q9P244 771 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ABCG2Q9UNQ0 655 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ALG1L2C9J202 215 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 J3KTA2 159 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TPST2O60704 377 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 GPIP06744 558 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TMPRSS3P57727 454 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ELOAQ14241 798 aaKnown RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 NPTX1Q15818 432 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TSPYL5Q86VY4 417 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TTC9Q92623 222 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 PMM1Q92871 262 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 C7orf34Q96L11 122 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 CHID1Q9BWS9 393 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 UGT2B28Q9BY64 529 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 AMBRA1Q9C0C7 1298 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 MARCH7Q9H992 704 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 SH2D2AQ9NP31 389 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 TNRC6AQ8NDV7 1962 aaKnown RBP25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 ATMQ13315 3056 aa25.11■■□□□ 1.61
SMARCD3-201ENST00000262188 A0A087WV48 116 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 SEMA7AO75326 666 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 ALX3O95076 343 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 ATE1O95260 518 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 RCVRNP35243 200 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 IFITM2Q01629 132 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 CHRNB3Q05901 458 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 SELENBP1Q13228 472 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 KCNAB2Q13303 367 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 ITGADQ13349 1161 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 GK3PQ14409 553 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 FAM98BQ52LJ0 330 aaKnown RBP25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 KRT80Q6KB66 452 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 DUSP19Q8WTR2 217 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 EXTL1Q92935 676 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 UTP23Q9BRU9 249 aaKnown RBP25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 DCUN1D5Q9BTE7 237 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 PROK2Q9HC23 129 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 SLC13A4Q9UKG4 626 aa25.1■■□□□ 1.61
SMARCD3-201ENST00000262188 TP53I11O14683 189 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 NEURL1O76050 574 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 RYKP34925 604 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 GAS1P54826 345 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 GPR85P60893 370 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 DEF8Q6ZN54 512 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 RFPL4BQ6ZWI9 263 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 PAQR8Q8TEZ7 354 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 SLC39A7Q92504 469 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF524Q96C55 264 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF486Q96H40 463 aaPredicted RBP25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ANKRD60Q9BZ19 345 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 WDR12Q9GZL7 423 aaKnown RBP25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 TRIM45Q9H8W5 580 aaPredicted RBP25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 RBMX2Q9Y388 322 aaKnown RBP25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 PCNX3Q9H6A9 2034 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 CEACAM4O75871 244 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 NGFRP08138 427 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 SLC7A1P30825 629 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 LCN1P31025 176 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF117Q03924 483 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 MFAP5Q13361 173 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 OR1C1Q15619 314 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 NRF1Q16656 503 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 RTL4Q6ZR62 310 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ZDHHC21Q8IVQ6 265 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 RNF138Q8WVD3 245 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 GEMIN6Q8WXD5 167 aaKnown RBP25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ARHGDIGQ99819 225 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 DHRS9Q9BPW9 319 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 ABI3Q9P2A4 366 aa25.09■■□□□ 1.61
SMARCD3-201ENST00000262188 HEATR5AQ86XA9 2040 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 K7EM74 188 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 GTPBP1O00178 669 aaKnown RBP25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 AP3D1O14617 1153 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 UMPSP11172 480 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 CCR4P51679 360 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 RGS8P57771 180 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 C19orf57Q0VDD7 668 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 IQCCQ4KMZ1 466 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 SLC22A10Q63ZE4 541 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 SLC51BQ86UW2 128 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 LSMEM1Q8N8F7 131 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 PSD4Q8NDX1 1056 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 KLHL1Q9NR64 748 aa25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 ZMAT5Q9UDW3 170 aaKnown RBP25.08■■□□□ 1.61
SMARCD3-201ENST00000262188 BOD1L1Q8NFC6 3051 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms