RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 OR10H1Q9Y4A9 318 aa14.56□□□□□ -0.08
LRFN1-201ENST00000248668 TMEM129A0AVI4 362 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 CASKO14936 926 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 HRO43593 1189 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 NGFRP08138 427 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 CCR5P51681 352 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 P2RX3P56373 397 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 GALK2Q01415 458 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 STK11Q15831 433 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 AMZ1Q400G9 498 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 PLK5Q496M5 336 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 TDHQ8IZJ6 230 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 RCBTB1Q8NDN9 531 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 DNAJA3Q96EY1 480 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 TNFRSF13CQ96RJ3 184 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 KRCC1Q9NPI7 259 aaPredicted RBP14.55□□□□□ -0.08
LRFN1-201ENST00000248668 COL6A3P12111 3177 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 FAM221BA6H8Z2 402 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 CDK2AP1O14519 115 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 SCO2O43819 266 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 LYPD3O95274 346 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 PROS1P07225 676 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 MYF5P13349 255 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 GLULP15104 373 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 S1PR1P21453 382 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 BMP8BP34820 402 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 BLKP51451 505 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 BNC1Q01954 994 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 ZNHIT3Q15649 155 aaPredicted RBP14.55□□□□□ -0.08
LRFN1-201ENST00000248668 BAK1Q16611 211 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 FAM131AQ6UXB0 335 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 BMP8AQ7Z5Y6 402 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 MARCH9Q86YJ5 346 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 CDK20Q8IZL9 346 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 FOXQ1Q9C009 403 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 PRTFDC1Q9NRG1 225 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 RP1P56715 2156 aa14.55□□□□□ -0.08
LRFN1-201ENST00000248668 CCDC85CA6NKD9 419 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 CENPBD1B2RD01 187 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 ALX3O95076 343 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 RNH1P13489 461 aaKnown RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 HTR1FP30939 366 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 CRYZQ08257 329 aaKnown RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 DSG2Q14126 1118 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 ALG10BQ5I7T1 473 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 PXDC1Q5TGL8 231 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 NXNL2Q5VZ03 156 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 NPSR1Q6W5P4 371 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 PRSS58Q8IYP2 241 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 KLHL36Q8N4N3 616 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 SLC25A46Q96AG3 418 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 DIRAS2Q96HU8 199 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 KATNB1Q9BVA0 655 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 PAQR5Q9NXK6 330 aaPredicted RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 SF3B6Q9Y3B4 125 aaKnown RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 CACNA1CQ13936 2221 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 IGHV1OR15-9A0A0B4J2B8 117 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 IGHV5-51A0A0C4DH38 117 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 FAM172BPA6NC97 362 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 SCO1O75880 301 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 HMGN1P05114 100 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 TBXA2RP21731 343 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 ALAS2P22557 587 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 PSPHP78330 225 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 ATAD3CQ5T2N8 411 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 GDPGP1Q6ZNW5 385 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 MED30Q96HR3 178 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 DGAT2Q96PD7 388 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 SPRTNQ9H040 489 aaPredicted RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF221Q9UK13 617 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 CMAHPQ9Y471 501 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 SHISA3A0PJX4 238 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 MAGEB4O15481 346 aaPredicted RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 NKX2-2O95096 273 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 GNG2P59768 71 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 FOXK2Q01167 660 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 RNLSQ5VYX0 342 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 OAFQ86UD1 273 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 LRRC17Q8N6Y2 441 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 OR4C3Q8NH37 302 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 CPNE5Q9HCH3 593 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 MRPS18AQ9NVS2 196 aaKnown RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 PLEKHB1Q9UF11 243 aaPredicted RBP14.54□□□□□ -0.08
LRFN1-201ENST00000248668 V9GYH0 126 aa14.54□□□□□ -0.08
LRFN1-201ENST00000248668 A0A075B6Q4 140 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ISPDA4D126 451 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 BHLHE40O14503 412 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 HCCSP53701 268 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 TPBGQ13641 420 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 CRMP1Q14194 572 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF79Q15937 498 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 SLC37A3Q8NCC5 494 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ATP6V1C2Q8NEY4 427 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 NEDD4LQ96PU5 975 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 SIGLEC7Q9Y286 467 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 SIRT4Q9Y6E7 314 aaPredicted RBP14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ARID1BQ8NFD5 2236 aaPredicted RBP14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ERVH48-1M5A8F1 160 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 MAP3K8P41279 467 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 CCR4P51679 360 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms