RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CBLN3Q6UW01 205 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MCEMP1Q8IX19 187 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 FAM71CQ8NEG0 241 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 OR10Q1Q8NGQ4 319 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 NFKBIDQ8NI38 313 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 RASSF5Q8WWW0 418 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MAL2Q969L2 176 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 SLC35B4Q969S0 331 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 DMRTA2Q96SC8 542 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MYLK2Q9H1R3 596 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 KAT8Q9H7Z6 458 aaKnown RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 NANOGQ9H9S0 305 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 TIGARQ9NQ88 270 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 KLHL28Q9NXS3 571 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 TNFRSF10DQ9UBN6 386 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 KCNE5Q9UJ90 142 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 ADAM21Q9UKJ8 722 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF443Q9Y2A4 671 aaPredicted RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 F8P00451 2351 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 CACNA1CQ13936 2221 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 NCOA6Q14686 2063 aaPredicted RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 HIVEP1P15822 2718 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CD8B2A6NJW9 211 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 HSPB2A8KAH6 182 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 C17orf51A8MQB3 221 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 FAAHO00519 579 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 AIM2O14862 343 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ZNHIT1O43257 154 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 DNAJA2O60884 412 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 SHOX2O60902 331 aaPredicted RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 IFNA14P01570 189 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 IL2RAP01589 272 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 PABPC4LP0CB38 370 aaKnown RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CD1EP15812 388 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 PRKAR1BP31321 381 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 MAP2K6P52564 334 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 B3GALT5-AS1P59052 145 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 PMPCAQ10713 525 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CAPRIN1Q14444 709 aaKnown RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 QPRTQ15274 297 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 HSPB2Q16082 182 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 TMEM44Q2T9K0 475 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ACSF3Q4G176 576 aaPredicted RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 SLC25A53Q5H9E4 307 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 RIPPLY2Q5TAB7 128 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 NSUN5P2Q63ZY6 315 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 HACD2Q6Y1H2 254 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 C3P1Q6ZMU1 363 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ESPNLQ6ZVH7 1005 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 OLIG3Q7RTU3 272 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 NET1Q7Z628 596 aaPredicted RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 MRGPRGQ86SM5 289 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 PATL1Q86TB9 770 aaKnown RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 GRAMD2AQ8IUY3 354 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CCDC197Q8NCU1 140 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 OR10A6Q8NH74 314 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ITLN2Q8WWU7 325 aaPredicted RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 RCN3Q96D15 328 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ZG16BQ96DA0 208 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 RNF145Q96MT1 663 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ZFP3Q96NJ6 502 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 TM9SF2Q99805 663 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 QRSL1Q9H0R6 528 aaKnown RBP10.18□□□□□ -0.78
SF3B6-201ENST00000233468 RUBCNLQ9H714 662 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 NDE1Q9NXR1 346 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF337Q9Y3M9 751 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 HRH3Q9Y5N1 445 aa10.18□□□□□ -0.78
SF3B6-201ENST00000233468 CENPVL1A0A0U1RR11 272 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 CDHR4A6H8M9 788 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 ETV2O00321 342 aaPredicted RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SEC14L5O43304 696 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 GLI4P10075 376 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 FCGR2AP12318 317 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 PRKCAP17252 672 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 CHRNB4P30926 498 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 RYKP34925 604 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 PCGF2P35227 344 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 TIMP3P35625 211 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 APOBEC1P41238 236 aaKnown RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 STARP49675 285 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 CLDN18P56856 261 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 FOXF1Q12946 379 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SELENBP1Q13228 472 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 MAPK11Q15759 364 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SGCBQ16585 318 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 RPS26P11Q5JNZ5 115 aaPredicted RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 MRPL2Q5T653 305 aaKnown RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 OR2A2Q6IF42 318 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 P4HA3Q7Z4N8 544 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 ARMC8Q8IUR7 673 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 UBQLNLQ8IYU4 475 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 LILRA2Q8N149 483 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 POU5F2Q8N7G0 328 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 TNIP2Q8NFZ5 429 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 OR5M1Q8NGP8 315 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms