RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 IMPAD1Q9NX62 359 aa11.23□□□□□ -0.61
SNU13-201ENST00000215956 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
SNU13-201ENST00000215956 PCDHGB5Q9Y5G0 923 aa11.23□□□□□ -0.61
SNU13-201ENST00000215956 SNX5Q9Y5X3 404 aa11.23□□□□□ -0.61
SNU13-201ENST00000215956 PDZD2O15018 2839 aa11.23□□□□□ -0.61
SNU13-201ENST00000215956 C2orf92A0A1B0GVN3 265 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 A6NL46 340 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 CPSF4LA6NMK7 179 aaKnown RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 IL33O95760 270 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 IGKV3-11P04433 115 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 CT45A8P0DMV1 189 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 CT45A9P0DMV2 189 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 CRHBPP24387 322 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 RFX3P48380 749 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 SH3BGRP55822 239 aaPredicted RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 CDK5R2Q13319 367 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 MAD2L1BPQ15013 274 aaPredicted RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 CT45A2Q5DJT8 189 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 PRAMEF17Q5VTA0 474 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 ANKRD34AQ69YU3 496 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 PGBD2Q6P3X8 592 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 ZNF773Q6PK81 442 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 NPSR1Q6W5P4 371 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 ZNF517Q6ZMY9 492 aaPredicted RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 COX15Q7KZN9 410 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 OR1N1Q8NGS0 311 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 SLC7A13Q8TCU3 470 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 ZNF721Q8TF20 911 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 IPCEF1Q8WWN9 437 aaPredicted RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 SMAD5Q99717 465 aaKnown RBP11.22□□□□□ -0.61
SNU13-201ENST00000215956 TMEM5Q9Y2B1 443 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 PCSK5Q92824 1860 aa11.22□□□□□ -0.61
SNU13-201ENST00000215956 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 VSTM2BA6NLU5 285 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 C9J4A7 227 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 TO15178 435 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 ALOX12BO75342 701 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 CLPSP04118 112 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 PRF1P14222 555 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 ADH7P40394 386 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 EMP2P54851 167 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 FGFBP1Q14512 234 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
SNU13-201ENST00000215956 KLHL17Q6TDP4 642 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 HMGN2P46Q86SG4 172 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 COMTD1Q86VU5 262 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 CDK20Q8IZL9 346 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 CISD2Q8N5K1 135 aaKnown RBP11.21□□□□□ -0.61
SNU13-201ENST00000215956 ZNF614Q8N883 585 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 TRUB1Q8WWH5 349 aaKnown RBP11.21□□□□□ -0.61
SNU13-201ENST00000215956 MPP4Q96JB8 637 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 Q96MT0 163 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 WDR54Q9H977 334 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 UBQLN4Q9NRR5 601 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 RLIMQ9NVW2 624 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 RPS6KB2Q9UBS0 482 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
SNU13-201ENST00000215956 HTR3EA5X5Y0 456 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SERINC4A6NH21 518 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 A8MUA0 341 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 NPIPB9F8W1W9 429 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 HRKO00198 91 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 MEN1O00255 615 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SLC1A7O00341 560 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 PEX12O00623 359 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SCDO00767 359 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 ABCB7O75027 752 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 TFAP2AP05549 437 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 ELK4P28324 431 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
SNU13-201ENST00000215956 IL12BP29460 328 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 POLR2IP36954 125 aaKnown RBP11.2□□□□□ -0.62
SNU13-201ENST00000215956 TSPAN31Q12999 210 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SEC23BQ15437 767 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 OR1Q1Q15612 314 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 MAPK14Q16539 360 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 MEP1AQ16819 746 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 ZNF385CQ66K41 422 aaPredicted RBP11.2□□□□□ -0.62
SNU13-201ENST00000215956 MBOAT2Q6ZWT7 520 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 GDF7Q7Z4P5 450 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 CNTRLQ7Z7A1 2325 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SHISA5Q8N114 240 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 SVOPQ8N4V2 548 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 FAM81AQ8TBF8 368 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 TP53INP1Q96A56 240 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 TUBA1CQ9BQE3 449 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 RSPO3Q9BXY4 272 aaPredicted RBP11.2□□□□□ -0.62
SNU13-201ENST00000215956 HHATLQ9HCP6 504 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 CTSFQ9UBX1 484 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 TCFL5Q9UL49 500 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 B3GNT3Q9Y2A9 372 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 FER1L5A0AVI2 2057 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
SNU13-201ENST00000215956 A0A087WUU8 490 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms