RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 MylipQ8BM54 445 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pqlc3Q8C6U2 202 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nedd4lQ8CFI0 1004 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr799Q8VGI7 311 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MynnQ99MD8 610 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Desi1Q9CQT7 168 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r29Q9EQ41 303 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Polg2Q9QZM2 459 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 H60cB1B213 197 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r86L7N213 316 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 S1pr1O08530 382 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cnih2O35089 160 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Drd4P51436 387 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rap1aP62835 184 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ErgP81270 486 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Wdr20Q3UWE6 569 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ifngr2Q63953 332 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr835Q7TRG7 311 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rims3Q80U57 307 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SynbQ8BI41 618 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ankmy1Q8C0W1 906 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dusp15Q8R4V2 235 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr672Q8VG28 312 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rap1bQ99JI6 184 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dhrs4Q99LB2 279 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mrps14Q9CR88 128 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Obp1aQ9D3H2 163 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Izumo1Q9D9J7 397 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem8aQ9ESN3 769 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Clca3a1Q9QX15 902 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 HnrnpfQ9Z2X1 415 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mpeg1A1L314 713 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc25a25A2ASZ8 469 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P01668 110 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ActbP60710 375 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Actg1P63260 375 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hyal4Q05A56 481 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Isg20l2Q3U1G5 368 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pan3Q640Q5 837 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem151aQ6GQT5 468 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r143Q7TQB9 293 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1167Q7TR26 316 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr776Q7TRI3 312 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rhox11Q810N8 206 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc25a21Q8BZ09 298 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem234Q8R1E7 140 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ttc36Q8VBW8 186 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 DutQ8VCG1 200 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ugt2b37Q8VCN3 530 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Emid1Q91VF5 444 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rwdd2bQ99M03 290 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pbx4Q99NE9 378 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MINDY3Q9CV28 444 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nkx2-4Q9EQM3 354 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cts6Q9ET52 334 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Klhl1Q9JI74 751 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Adam23Q9R1V7 829 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rgs6Q9Z2H2 472 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1555-ps1A0A140LHT7 321 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 1700023F06RikA2AB62 382 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1564K7N6V7 318 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Folr1P35846 255 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 TigitP86176 249 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 B4galnt2Q09199 510 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Arntl2Q2VPD4 579 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fam71f1Q3UZD7 341 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1161Q7TR29 321 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp184Q7TSH9 737 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Znf775Q8BI73 538 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cdkl3Q8BLF2 595 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxl22Q8C7B6 236 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hpf1Q8CFE2 346 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr881Q8VF63 314 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Q8WUR0 141 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ier3ip1Q9CR20 82 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Akap8lQ9R0L7 642 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Syt8Q9R0N6 395 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm5493S4R2D1 92 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm29106A0A087WSP8 697 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 1810010D01RikA0A1L1SR87 51 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Bhlhe40O35185 411 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nmur1O55040 428 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Psmb5O55234 264 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CcnkO88874 554 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tcte3P11985 191 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SnrpgP62309 76 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Crabp1P62965 137 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mmp7Q10738 264 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Meig1Q61845 88 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NnatQ61979 81 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Amer3Q6NS69 780 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 D11Wsu47eQ6PIX9 558 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm10330Q8BKS1 112 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 IlvblQ8BU33 632 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Lypd4Q8BVP6 246 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmed4Q8R1V4 227 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr649Q8VGW1 312 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gatad2bQ8VHR5 594 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Impa2Q91UZ5 290 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Papd4Q91YI6 484 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms