RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ldlrad4Q8BWJ4 306 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Igsf8Q8R366 611 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr215Q8VF82 310 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Spred1Q924S8 444 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Tnfrsf12aQ9CR75 129 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Q9D112 206 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Chrm3Q9ERZ3 589 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Lmx1aQ9JKU8 382 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 A0A1L1SV24 88 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 A0A286YCQ8 80 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Ssxa1B1AUS7 101 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 TesP47226 423 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Adamts15P59384 950 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 S100a13P97352 98 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Snai2P97469 269 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 ptchd1Q14B62 888 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 UbqlnlQ14DL0 610 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr744Q7TRM0 323 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Slc25a32Q8BMG8 316 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Banf2Q8BVR0 90 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Commd1Q8K4M5 188 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Nrif1Q923B3 828 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Mrpl9Q99N94 265 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Armc10Q9D0L7 306 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 9530002B09RikQ9EPV7 135 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Prr14lE9Q7C4 1971 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Gm5286E0CXI6 357 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr550E9Q544 316 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Ltb4rO88855 351 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 ChrneP20782 493 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 GalP47212 124 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 PitpnaP53810 271 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Slc12a3P59158 1002 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Ikzf2P81183 526 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Cpne7Q0VE82 557 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Tbrg1Q3UB74 406 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Itgb2lQ3UV74 738 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Grhl3Q5FWH3 603 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Cd6Q61003 665 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Dyrk1aQ61214 763 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Phlda1Q62392 405 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 PdgfrlQ6PE55 375 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Fam149aQ8CFV2 787 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Ccm2Q8K2Y9 453 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Ndc1Q8VCB1 673 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr1504Q8VFQ4 315 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr516Q8VFZ5 314 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Mrpl19Q9D338 292 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Chp2Q9D869 196 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Pebp4Q9D9G2 242 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Dnajb2Q9QYI5 324 aa10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Eif4hQ9WUK2 248 aaKnown RBP10.03□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Gm28557A0A087WQQ0 336 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Gm4858A0A0A6YWS7 318 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr1255A2AUA4 310 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Olfr724K7N5X7 309 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Vmn2r117K7N6V1 857 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Vmn2r8L7N472 848 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 HpnO35453 436 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 BckdkO55028 412 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Wnt2bO70283 389 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Pdlim1O70400 327 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Agtr1aP29754 359 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 McptlQ00356 246 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Jazf1Q80ZQ5 243 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Slc36a2Q8BHK3 478 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Timmdc1Q8BUY5 285 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Fmo4Q8VHG0 560 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 SdhcQ9CZB0 169 aaKnown RBP10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Cdc40Q9DC48 579 aaKnown RBP10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Prl5a1Q9JII2 230 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Nrip3Q9JJR9 240 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 AgtrapQ9WVK0 161 aa10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Myo5aQ99104 1853 aaKnown RBP10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 Snrnp200Q6P4T2 2136 aaKnown RBP10.02□□□□□ -0.8
Rnf40-201ENSMUST00000033088 9930021J03RikH3BKP8 2027 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Tcte1A6H639 498 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Gm11127A7VMS2 374 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Gm12789B1AUV7 164 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Enthd1E9Q1Z2 618 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Gm5798F7BTS7 198 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Cldn34aG3UW52 211 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 NgpO08692 167 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Csnk2a2O54833 350 aaKnown RBP10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 P01810 119 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Barhl1P63157 327 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 GnrhrQ01776 327 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Fbxw16Q497Z0 464 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Ankrd37Q569N2 159 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Fzd6Q61089 709 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Gm5591Q8CDK1 855 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 4921517D22RikQ8CET0 269 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Olfr952Q8VFD7 314 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Olfr651Q8VG78 313 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Adam33Q923W9 797 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Tram2Q924Z5 370 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Mcoln1Q99J21 580 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Mrm1Q99J25 320 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Ier3ip1Q9CR20 82 aa10.02□□□□□ -0.81
Rnf40-201ENSMUST00000033088 Fam96bQ9D187 163 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms