RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 E2F1Q01094 437 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 SCN1BQ07699 218 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 ASAH1Q13510 395 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 FAM53BQ14153 422 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 RAB43Q86YS6 212 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 LNX2Q8N448 690 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 ARHGEF39Q8N4T4 335 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 RFLNBQ8N5W9 214 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 ACBD7Q8N6N7 88 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 TOR1AIP2Q8NFQ8 470 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 SLC35B4Q969S0 331 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 ZNF486Q96H40 463 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-225ENST00000640209 ST6GAL2Q96JF0 529 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 STACQ99469 402 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 IFT27Q9BW83 186 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 OR51V1Q9H2C8 321 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 TP63Q9H3D4 680 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-225ENST00000640209 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 NEK6Q9HC98 313 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 SATB2Q9UPW6 733 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 N6AMT1Q9Y5N5 214 aa8.65□□□□□ -1.02
NECAP1-225ENST00000640209 A0A1B0GWA3 101 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 MEIOCA2RUB1 952 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 B4DXG7 233 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CHST10O43529 356 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PRKNO60260 465 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PTP4A3O75365 173 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CDC123O75794 336 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PPP1R3DO95685 299 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 SEMA4FO95754 770 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 HLA-DPB1P04440 258 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ZNF10P21506 573 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 HOXD12P35452 270 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 LTBRP36941 435 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CRMP1Q14194 572 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ERV3-1Q14264 604 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 AMZ1Q400G9 498 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 RPTNQ6XPR3 784 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 GDPD1Q8N9F7 314 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 OR10H4Q8NGA5 316 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CAPSLQ8WWF8 208 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PEX11GQ96HA9 241 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TNFRSF13CQ96RJ3 184 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TEX12Q9BXU0 123 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TTTY10Q9BZA0 68 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 C2orf42Q9NWW7 574 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CD207Q9UJ71 328 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 GRIP1Q9Y3R0 1128 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 COL4A2P08572 1712 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 A0A0B4J2E0 115 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 A0A1B0GX12 115 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 C10orf142B7Z368 130 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 GNB5O14775 395 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 MAGEB4O15481 346 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 NKX2-2O95096 273 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TNFP01375 233 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 SAGP10523 405 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 DRD5P21918 477 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 SHC1P29353 583 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ACAA2P42765 397 aaKnown RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 EVX1P49640 407 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 HCCSP53701 268 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 YPEL5P62699 121 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 MAT1AQ00266 395 aaKnown RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ZNF85Q03923 595 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 NNATQ16517 81 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TMEM44Q2T9K0 475 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ZNF544Q6NX49 715 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TMEM53Q6P2H8 277 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TMPRSS11FQ6ZWK6 438 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 SSX6Q7RTT6 188 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 GID4Q8IVV7 300 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ARL14Q8N4G2 192 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 AVL9Q8NBF6 648 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 C17orf47Q8NEP4 570 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 OR52L1Q8NGH7 329 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 AP3S1Q92572 193 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 EFHD2Q96C19 240 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-225ENST00000640209 TEAD3Q99594 435 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 SLC22A4Q9H015 551 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 CMC2Q9NRP2 79 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 POT1Q9NUX5 634 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 ASB6Q9NWX5 421 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 BABAM2Q9NXR7 383 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 HCN3Q9P1Z3 774 aa8.64□□□□□ -1.03
NECAP1-225ENST00000640209 A0A0A6YYC8 382 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-225ENST00000640209 A0A1B0GVC2 190 aa8.63□□□□□ -1.03
NECAP1-225ENST00000640209 A6NIN4 97 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms