RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 LCN8Q6JVE9 175 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 NANOGP8Q6NSW7 305 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 SLC2A7Q6PXP3 512 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 IKBIPQ70UQ0 350 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 OLIG3Q7RTU3 272 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 BTLAQ7Z6A9 289 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 AQP12AQ8IXF9 295 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 RIMKLAQ8IXN7 391 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 PM20D2Q8IYS1 436 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 KRTCAP2Q8N6L1 136 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 OR7A2PQ8NGA2 310 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 OR14L1PQ8NHC6 308 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 FBXO30Q8TB52 745 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 DUSP19Q8WTR2 217 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 WNT2BQ93097 391 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 POP5Q969H6 163 aaKnown RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 INTS12Q96CB8 462 aaKnown RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 TMCO6Q96DC7 493 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 FAM120BQ96EK7 910 aaKnown RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 C1GALT1C1Q96EU7 318 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 OR52E6Q96RD3 313 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 CGREF1Q99674 301 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 KCTD14Q9BQ13 255 aaPredicted RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 KLHL4Q9C0H6 718 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 ALG2Q9H553 416 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 REEP4Q9H6H4 257 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 NANOGQ9H9S0 305 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 CCM2LQ9NUG4 571 aaPredicted RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 CMTM6Q9NX76 183 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 DNAJB12Q9NXW2 375 aaKnown RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 GALNT8Q9NY28 637 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 TAS2R9Q9NYW1 312 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 ATP6V1HQ9UI12 483 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 LRCH1Q9Y2L9 728 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 WBP11Q9Y2W2 641 aaKnown RBP7.06□□□□□ -1.28
PNKP-229ENST00000637897 AP4S1Q9Y587 144 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 SNX13Q9Y5W8 968 aa7.06□□□□□ -1.28
PNKP-229ENST00000637897 A0A096LPI6 279 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 NPIPA5A0A0B4J1W7 369 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 CENPVL1A0A0U1RR11 272 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 NPIPA7E9PJI5 369 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DVL2O14641 736 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 SCN2BO60939 215 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 COQ9O75208 318 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 GMNNO75496 209 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 AQP8O94778 261 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 KCNK2O95069 426 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 OXSR1O95747 527 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 ANGPTL1O95841 491 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 IL2RAP01589 272 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 HRGP04196 525 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 GPIP06744 558 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 NPIPA8P0DM63 369 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 UMPSP11172 480 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 IL12BP29460 328 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 GSK3BP49841 420 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 DGKQP52824 942 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DSCR4P56555 118 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 RPP38P78345 283 aaKnown RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 PRR5P85299 388 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 PLAURQ03405 335 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 LIPEQ05469 1076 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 FAM27E3Q08E93 113 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 LRRC74AQ0VAA2 488 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 TRIP10Q15642 601 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 BCL2A1Q16548 175 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.05□□□□□ -1.28
PNKP-229ENST00000637897 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 SPANXN4Q5MJ08 99 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.05□□□□□ -1.28
PNKP-229ENST00000637897 OGFRL1Q5TC84 451 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 MFSD12Q6NUT3 480 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 FIGNL1Q6PIW4 674 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 IZUMO2Q6UXV1 221 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DLEU7Q6UYE1 221 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 LUZP2Q86TE4 346 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 TMEM200AQ86VY9 491 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 IFNEQ86WN2 208 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 SAMD14Q8IZD0 417 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 FAM156AQ8NDB6 213 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 PSMA8Q8TAA3 256 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 GTF2H4Q92759 462 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 ARSGQ96EG1 525 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 RMND5BQ96G75 393 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 ITCHQ96J02 903 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 SFXN2Q96NB2 322 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 ZNF570Q96NI8 536 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 ECSITQ9BQ95 431 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 YIPF4Q9BSR8 244 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 TMUB1Q9BVT8 246 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 PCDHAC1Q9H158 963 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 VCXQ9H320 206 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 CXorf36Q9H7Y0 433 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 EQTNQ9NQ60 294 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 MIEF1Q9NQG6 463 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 DDX18Q9NVP1 670 aaKnown RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 ARMC1Q9NVT9 282 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 GPATCH2Q9NW75 528 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms