RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GLYR1Q49A26 553 aaPredicted RBP14.51□□□□□ -0.09
CLN6-216ENST00000636876 WIPI1Q5MNZ9 446 aaPredicted RBP14.51□□□□□ -0.09
CLN6-216ENST00000636876 TRILQ7L0X0 811 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 ZNF550Q7Z398 422 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 PRICKLE2Q7Z3G6 844 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 SPPL2CQ8IUH8 684 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 RNF145Q96MT1 663 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 CADM1Q9BY67 442 aaKnown RBP14.51□□□□□ -0.09
CLN6-216ENST00000636876 PCDHAC1Q9H158 963 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 LRMDAQ9H2I8 198 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 EVA1AQ9H8M9 152 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 GORASP2Q9H8Y8 452 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 ADPRHL2Q9NX46 363 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 BAG5Q9UL15 447 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 VDAC3Q9Y277 283 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 MED12Q93074 2177 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 PTPN13Q12923 2485 aa14.51□□□□□ -0.09
CLN6-216ENST00000636876 TRGV5A0A0B4J1U4 118 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 A0A1B0GVC2 190 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 C7orf72A4D263 438 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 TMEM229AB2RXF0 380 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 FAAHO00519 579 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 AP3D1O14617 1153 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 GSC2O15499 205 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 FRS3O43559 492 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 SUSD5O60279 629 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 FESP07332 822 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 LINGO3P0C6S8 592 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 PRG2P13727 222 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 EDN3P14138 238 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 TCEA1P23193 301 aaKnown RBP14.5□□□□□ -0.09
CLN6-216ENST00000636876 ACAA2P42765 397 aaKnown RBP14.5□□□□□ -0.09
CLN6-216ENST00000636876 QPRTQ15274 297 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 TOMM34Q15785 309 aaPredicted RBP14.5□□□□□ -0.09
CLN6-216ENST00000636876 NRF1Q16656 503 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 TMEM44Q2T9K0 475 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 PGM2L1Q6PCE3 622 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 GHDCQ8N2G8 530 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 NEIL3Q8TAT5 605 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 ZBTB8AQ96BR9 441 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 ZNF524Q96C55 264 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 ARHGDIGQ99819 225 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 MUC13Q9H3R2 512 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 LDAHQ9H6V9 325 aa14.5□□□□□ -0.09
CLN6-216ENST00000636876 RPH3AQ9Y2J0 694 aaPredicted RBP14.5□□□□□ -0.09
CLN6-216ENST00000636876 HECTD1Q9ULT8 2610 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 PYCARD-AS1I3L0S3 204 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 M0R3H8 397 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 ETV2O00321 342 aaPredicted RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 ZNF682O95780 498 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 SERPINA1P01009 418 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 ZNF136P52737 540 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 RGS8P57771 180 aaPredicted RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 B3GALT5-AS1P59052 145 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 SELENOWP63302 87 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 FOXK1P85037 733 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 TLE1Q04724 770 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 FOXF1Q12946 379 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 TRIM25Q14258 630 aaKnown RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 SLC25A53Q5H9E4 307 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 RAET1LQ5VY80 246 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 CBLL1Q75N03 491 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 ZGRF1Q86YA3 2104 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 EID3Q8N140 333 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 GTPBP8Q8N3Z3 284 aaPredicted RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 LZICQ8WZA0 190 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 ST8SIA1Q92185 356 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 PROX1Q92786 737 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 MCUR1Q96AQ8 359 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 CCDC124Q96CT7 223 aaKnown RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 SFXN2Q96NB2 322 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 NPAS1Q99742 590 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 WFDC6Q9BQY6 131 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 EXO5Q9H790 373 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 ACER3Q9NUN7 267 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 DCAF13Q9NV06 445 aaKnown RBP14.49□□□□□ -0.09
CLN6-216ENST00000636876 ACTR3BQ9P1U1 418 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 SLC6A5Q9Y345 797 aa14.49□□□□□ -0.09
CLN6-216ENST00000636876 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 OR2M5A3KFT3 312 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 SHISA8B8ZZ34 492 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 J3QKU1 62 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 AQP7O14520 342 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 NTN1O95631 604 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 GP1BBP13224 206 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 UQCRBP14927 111 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ZNF17P17021 662 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 PRKCAP17252 672 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 GCKP35557 465 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 EIF1P41567 113 aaKnown RBP14.48□□□□□ -0.09
CLN6-216ENST00000636876 IDH2P48735 452 aaKnown RBP14.48□□□□□ -0.09
CLN6-216ENST00000636876 GFRA1P56159 465 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 DLX5P56178 289 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 SESN3P58005 492 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 HOXC5Q00444 222 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 HSF1Q00613 529 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ARHGAP11AQ6P4F7 1023 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 GFRALQ6UXV0 394 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ASRGL1Q7L266 308 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms