RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 BCL2A1Q16548 175 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 ZNF311Q5JNZ3 666 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 TMEM211Q6ICI0 200 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 HACD2Q6Y1H2 254 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 SLC30A8Q8IWU4 369 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 ZZZ3Q8IYH5 903 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 ZNF440Q8IYI8 595 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 PHF10Q8WUB8 498 aaKnown RBP13.99□□□□□ -0.17
CLN6-211ENST00000635754 TMEM234Q8WY98 164 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 CNOT9Q92600 299 aaKnown RBP13.99□□□□□ -0.17
CLN6-211ENST00000635754 CCDC120Q96HB5 630 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 DMRTA2Q96SC8 542 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 DNAJB12Q9NXW2 375 aaKnown RBP13.99□□□□□ -0.17
CLN6-211ENST00000635754 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 ZNF337Q9Y3M9 751 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 ARHGAP21Q5T5U3 1957 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 CDHR4A6H8M9 788 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 NDUFAB1O14561 156 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 DNAJA2O60884 412 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 UQCRBP14927 111 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 PRKCAP17252 672 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ME2P23368 584 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ELK4P28324 431 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ADH6P28332 368 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 AQP1P29972 269 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 RYKP34925 604 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 PCGF2P35227 344 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 CLDN18P56856 261 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 EEF1A1P68104 462 aaKnown RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 PLAURQ03405 335 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 SRYQ05066 204 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 TOMM34Q15785 309 aaPredicted RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 INTS11Q5TA45 600 aaKnown RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 B3GNT6Q6ZMB0 384 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 UBQLNLQ8IYU4 475 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 MEIOBQ8N635 442 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ZNF563Q8TA94 476 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ST8SIA1Q92185 356 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 SMPDL3BQ92485 455 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 HOPXQ9BPY8 73 aaPredicted RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 PIF1Q9H611 641 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 AP3M1Q9Y2T2 418 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 FAM215AQ9Y5M1 114 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 BAHCC1Q9P281 2608 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 PRORSD1PA6NEY8 169 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 SEC14L5O43304 696 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 SERPINB7O75635 380 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 PSMA4P25789 261 aaKnown RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 VMACQ2NL98 169 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ACSF3Q4G176 576 aaPredicted RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 SLC25A53Q5H9E4 307 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 FAM91A1Q658Y4 838 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 RTL6Q6ICC9 239 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ERICH5Q6P6B1 374 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 RPTNQ6XPR3 784 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 CALHM3Q86XJ0 350 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 GRAMD2AQ8IUY3 354 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 RPRMLQ8N4K4 120 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 FBXO27Q8NI29 283 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 ZPLD1Q8TCW7 415 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 BCAS4Q8TDM0 211 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 NPAS1Q99742 590 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 GPATCH1Q9BRR8 931 aaKnown RBP13.98□□□□□ -0.17
CLN6-211ENST00000635754 RLIMQ9NVW2 624 aa13.98□□□□□ -0.17
CLN6-211ENST00000635754 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 ZG16O60844 167 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 PRKAR1BP31321 381 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 GZMMP51124 257 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 SMSP52788 366 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 PCBP3P57721 371 aaKnown RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 EEFSECP57772 596 aaKnown RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 SESN3P58005 492 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 RAC1P63000 192 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 CHMP1BQ7LBR1 199 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 PATL1Q86TB9 770 aaKnown RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 ARMC8Q8IUR7 673 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 LACC1Q8IV20 430 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 CLIP4Q8N3C7 705 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 MARVELD2Q8N4S9 558 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 BHLHE22Q8NFJ8 381 aaPredicted RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 POC1BQ8TC44 478 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
CLN6-211ENST00000635754 ZNF583Q96ND8 569 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 TRIB1Q96RU8 372 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 TUBA1CQ9BQE3 449 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 TTYH2Q9BSA4 534 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
CLN6-211ENST00000635754 NCOA6Q14686 2063 aaPredicted RBP13.96□□□□□ -0.17
CLN6-211ENST00000635754 DOPEY1Q5JWR5 2465 aa13.96□□□□□ -0.17
CLN6-211ENST00000635754 WIPF3A6NGB9 483 aa13.96□□□□□ -0.18
CLN6-211ENST00000635754 CCT8L1PA6NM43 557 aa13.96□□□□□ -0.18
CLN6-211ENST00000635754 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.18
CLN6-211ENST00000635754 ETV2O00321 342 aaPredicted RBP13.96□□□□□ -0.18
CLN6-211ENST00000635754 FAAHO00519 579 aa13.96□□□□□ -0.18
CLN6-211ENST00000635754 AP3D1O14617 1153 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms