RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RNF145Q96MT1 663 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 UCN2Q96RP3 112 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 KLHDC3Q9BQ90 382 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 NANOGQ9H9S0 305 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 CALHM2Q9HA72 323 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 DNAJB12Q9NXW2 375 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF232Q9UNY5 417 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPB-209ENST00000634889 ARHGAP21Q5T5U3 1957 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 CD8B2A6NJW9 211 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 CLDN24A6NM45 220 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 BCAS1O75363 584 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 NTN1O95631 604 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 GLI4P10075 376 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 ME2P23368 584 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 PRDX6P30041 224 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 TIMP3P35625 211 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 DLX5P56178 289 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 NUP107P57740 925 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 RAC1P63000 192 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 EEF1A1P68104 462 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 SRYQ05066 204 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 PMPCAQ10713 525 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 FOXF1Q12946 379 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 SELPLGQ14242 412 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 TOMM34Q15785 309 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 RIPPLY2Q5TAB7 128 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 NCCRP1Q6ZVX7 275 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 MRGPRGQ86SM5 289 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 ADGRE4PQ86SQ3 457 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 PTOV1Q86YD1 416 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF440Q8IYI8 595 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 POU5F2Q8N7G0 328 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 ANKS4BQ8N8V4 417 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 HIPK4Q8NE63 616 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 POC1BQ8TC44 478 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 RCN3Q96D15 328 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 PSMG3-AS1Q96PY0 264 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 TUBA1CQ9BQE3 449 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 SLC39A3Q9BRY0 314 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 TRIM8Q9BZR9 551 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 COQ3Q9NZJ6 369 aa13.31□□□□□ -0.28
CDC42BPB-209ENST00000634889 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 SHISA8B8ZZ34 492 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 FAAHO00519 579 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 DCTN3O75935 186 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 UQCRBP14927 111 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF836Q6ZNA1 936 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 CHMP1BQ7LBR1 199 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ARPINQ7Z6K5 226 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 GGNQ86UU5 652 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 TREML1Q86YW5 311 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 BHLHE22Q8NFJ8 381 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 OR10A6Q8NH74 314 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 FBXO27Q8NI29 283 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ASB5Q8WWX0 329 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 CNOT9Q92600 299 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 SLC35B4Q969S0 331 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 LRRC37BQ96QE4 947 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 TRIB1Q96RU8 372 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 CCT8L2Q96SF2 557 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZNF607Q96SK3 696 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 NPAS1Q99742 590 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 EFCAB1Q9HAE3 211 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ACER3Q9NUN7 267 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 ADAM21Q9UKJ8 722 aa13.3□□□□□ -0.28
CDC42BPB-209ENST00000634889 DOPEY1Q5JWR5 2465 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 MBD3L4A6NDZ8 208 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 MBD3L3A6NE82 208 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 PRORSD1PA6NEY8 169 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 CFAP73A6NFT4 308 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 MBD3L5A6NJ08 208 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 GJE1A6NN92 205 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 SERPINB7O75635 380 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 CHRNB4P30926 498 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 GZMMP51124 257 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 CLDN15P56746 228 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 CLDN20P56880 219 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 RPS3AP61247 264 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 RABL3Q5HYI8 236 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 GKAP1Q5VSY0 366 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 MYO7BQ6PIF6 2116 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 HACD2Q6Y1H2 254 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 ESPNLQ6ZVH7 1005 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 SEM1Q6ZVN7 128 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 ZZZ3Q8IYH5 903 aa13.29□□□□□ -0.28
CDC42BPB-209ENST00000634889 MBD3L2Q8NHZ7 208 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms