RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ZNF696Q9H7X3 374 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 LIN28AQ9H9Z2 209 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ZBTB20Q9HC78 741 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF160Q9HCG1 818 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 SDHAF3Q9NRP4 125 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 SCOCQ9UIL1 159 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TMEM5Q9Y2B1 443 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 CARD8Q9Y2G2 431 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 NTNG1Q9Y2I2 539 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 YARS2Q9Y2Z4 477 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 GPR179Q6PRD1 2367 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 NUP214P35658 2090 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 FRYLO94915 3013 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 LOC101059948A0A1B0GTJ6 334 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CDRT15L2A8MXV6 281 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 TP53I11O14683 189 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 HCRTR2O43614 444 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 OR6B1O95007 311 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 LYPD3O95274 346 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CLIC3O95833 236 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 ANGPTL1O95841 491 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 THY1P04216 161 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SERPINA7P05543 415 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 PNMTP11086 282 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 PGCP20142 388 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 FPR3P25089 353 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 GGT2P36268 569 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 POLR2IP36954 125 aaKnown RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 OMPP47874 163 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 GSSP48637 474 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SSR4P51571 173 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 P2RX1P51575 399 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CCR4P51679 360 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CRISP1P54107 249 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SUMO3P55854 103 aaPredicted RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 FBXW4P57775 412 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 MYBPC1Q00872 1141 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF117Q03924 483 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 C17orf67Q0P5P2 114 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CHAF1BQ13112 559 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SNTA1Q13424 505 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 TOP3AQ13472 1001 aaPredicted RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CBFBQ13951 182 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 NTRK2Q16620 822 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 NDUFAF6Q330K2 333 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 KCTD21Q4G0X4 260 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 ALG10BQ5I7T1 473 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 TMEM81Q6P7N7 255 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 LYPD8Q6UX82 237 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 APOOLQ6UXV4 268 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 ZER1Q7Z7L7 766 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 MRGPREQ86SM8 312 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 MARCH3Q86UD3 253 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF786Q8N393 782 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 CADM2Q8N3J6 435 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 GATSQ8NAP1 163 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 OR5W2Q8NH69 310 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 RNF217Q8TC41 542 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 GRHL3Q8TE85 626 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 TMEM255BQ8WV15 326 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 RNF138Q8WVD3 245 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SPACA9Q96E40 222 aaPredicted RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 HRASLS5Q96KN8 279 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 RASL10BQ96S79 203 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 SECISBP2Q96T21 854 aaKnown RBP6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 PRSS27Q9BQR3 290 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 C12orf10Q9HB07 376 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 BATF3Q9NR55 127 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 P4HTMQ9NXG6 502 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 REV1Q9UBZ9 1251 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 FBXL4Q9UKA2 621 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 MED31Q9Y3C7 131 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 PCDHGB6Q9Y5F9 930 aa6.9□□□□□ -1.3
PTP4A1-206ENST00000627002 TPRP12270 2363 aaKnown RBP6.9□□□□□ -1.31
PTP4A1-206ENST00000627002 A0A087WUJ7 227 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 ZAR1LA6NP61 321 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 H3BN98 237 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 KLF4O43474 513 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 SCO2O43819 266 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 MPZL2O60487 215 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 ADAM11O75078 769 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 ITGA10O75578 1167 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 IGF2P01344 180 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 F8A1P23610 371 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 CHMP24386 653 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 ITPKBP27987 946 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 POU1F1P28069 291 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 MSX1P28360 303 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 SLC1A3P43003 542 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 IDH2P48735 452 aaKnown RBP6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 CTBP2P56545 445 aa6.89□□□□□ -1.31
PTP4A1-206ENST00000627002 MLF1P58340 268 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms