RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FOXF1Q12946 379 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 FBLN7Q53RD9 439 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 MROH9Q5TGP6 573 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 FAHD2BQ6P2I3 314 aaPredicted RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 GOLGA7Q7Z5G4 137 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 SPATA19Q7Z5L4 167 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 ZCCHC24Q8N2G6 241 aaKnown RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 EXOSC8Q96B26 276 aaKnown RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 FAHD2AQ96GK7 314 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 SH3YL1Q96HL8 342 aaPredicted RBP12.09□□□□□ -0.47
SNX1-214ENST00000625244 MUS81Q96NY9 551 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 FAIM2Q9BWQ8 316 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 TXLNGYQ9BZA5 131 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
SNX1-214ENST00000625244 GXYLT2A0PJZ3 443 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 B9A039 149 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 ALG1L2C9J202 215 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 LYNX1G3V0Z9 82 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 MSMBP08118 114 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 LYNX1P0DP58 116 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 IFNGR1P15260 489 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 TYK2P29597 1187 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 PPOXP50336 477 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 IFFO1Q0D2I5 559 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 GABRA6Q16445 453 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 FRG2Q64ET8 278 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 GALNT5Q7Z7M9 940 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 UBE2J2Q8N2K1 259 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 ATP6V1C2Q8NEY4 427 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 OR4C3Q8NH37 302 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 FRG2BQ96QU4 278 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 Q9N2J8 555 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 SENP1Q9P0U3 644 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 PSMC3IPQ9P2W1 217 aaPredicted RBP12.08□□□□□ -0.48
SNX1-214ENST00000625244 MRTO4Q9UKD2 239 aaKnown RBP12.08□□□□□ -0.48
SNX1-214ENST00000625244 SLC12A4Q9UP95 1085 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 PPIAL4AQ9Y536 164 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 PCDHB14Q9Y5E9 798 aa12.08□□□□□ -0.48
SNX1-214ENST00000625244 A0A1W2PNR3 127 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 ZNF724A8MTY0 619 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 OR7A17O14581 309 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 ZNF195O14628 629 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 CYTIPO60759 359 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 COQ9O75208 318 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 ESRRBO95718 433 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 OXSR1O95747 527 aaPredicted RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 ELK4P28324 431 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 PSMD4P55036 377 aaKnown RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 ZKSCAN8Q15776 578 aaPredicted RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 ADIPOQQ15848 244 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 SGO1Q5FBB7 561 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 KLC3Q6P597 504 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 ZFP90Q8TF47 636 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
SNX1-214ENST00000625244 RAB21Q9UL25 225 aa12.07□□□□□ -0.48
SNX1-214ENST00000625244 PNPP00491 289 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 ITGA5P08648 1049 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 IL3P08700 152 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 OR4A8P0C604 315 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 DDX5P17844 614 aaKnown RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 GABRA3P34903 492 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 HSD17B3P37058 310 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 PRIM2P49643 509 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 RAC3P60763 192 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 EFNB3Q15768 340 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 FAM83EQ2M2I3 478 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 FAM219BQ5XKK7 198 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 CMC1Q7Z7K0 106 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 FAM9CQ8IZT9 166 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 FBXO27Q8NI29 283 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 DCAKDQ8WVC6 231 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 WDR60Q8WVS4 1066 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 PIK3R3Q92569 461 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 NARFLQ9H6Q4 476 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 NMRAL1Q9HBL8 299 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 CA10Q9NS85 328 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 FARSBQ9NSD9 589 aaKnown RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 TAS2R16Q9NYV7 291 aa12.06□□□□□ -0.48
SNX1-214ENST00000625244 C19orf53Q9UNZ5 99 aaPredicted RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 EPPK1P58107 5090 aaKnown RBP12.06□□□□□ -0.48
SNX1-214ENST00000625244 A0A096LPK6 155 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 GJE1A6NN92 205 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms