RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 A0A1B0GW55 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 UBE2QL1A1L167 161 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 OR2W5A6NFC9 320 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TO15178 435 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 PRAMEF2O60811 474 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 HMGN1P05114 100 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L2P0CJ85 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L3P0CJ86 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L4P0CJ87 422 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L5P0CJ88 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L6P0CJ89 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4L7P0CJ90 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 GALP22466 123 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 RAB13P51153 203 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 RIPPLY1Q0D2K3 151 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 SERTAD2Q14140 314 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 LASP1Q14847 261 aaKnown RBP14.12□□□□□ -0.15
PMS1-221ENST00000624204 ODF4Q2M2E3 257 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TMEM44Q2T9K0 475 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 PRAMEF13Q5VWM6 474 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 ZNF783Q6ZMS7 281 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 CACUL1Q86Y37 369 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 OR6V1Q8N148 313 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 LRIG1Q96JA1 1093 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
PMS1-221ENST00000624204 DUX4Q9UBX2 424 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 A0A0G2JPF8 293 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 HNRNPCL3B7ZW38 293 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 GOSR2O14653 212 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 VNN2O95498 520 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 HNRNPCL4P0DMR1 293 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 EPXP11678 715 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 ACHEP22303 614 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TNFRSF17Q02223 184 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TRAM2Q15035 370 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 CBLN2Q8IUK8 224 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 MCATQ8IVS2 390 aaKnown RBP14.12□□□□□ -0.15
PMS1-221ENST00000624204 FAM71CQ8NEG0 241 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 AUTS2Q8WXX7 1259 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 F2RL3Q96RI0 385 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 CWH43Q9H720 699 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 ADAM12O43184 909 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 SLCO2B1O94956 709 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 RASGRP1O95267 797 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 DCTDP32321 178 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 STAT5AP42229 794 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 LTB4RQ15722 352 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 SPICQ8N5J4 248 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TMEM185AQ8NFB2 350 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 NANPQ8TBE9 248 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TNFAIP8L1Q8WVP5 186 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 HCAR1Q9BXC0 346 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 TAS2R10Q9NYW0 307 aa14.12□□□□□ -0.15
PMS1-221ENST00000624204 FEZF1A0PJY2 475 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 FOXE1O00358 373 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 SCAMP1O15126 338 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 PPM1DO15297 605 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 HPP00738 406 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 F12P00748 615 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 CHRM4P08173 479 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 LIPCP11150 499 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 GMFBP60983 142 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 SORDQ00796 357 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 DHODHQ02127 395 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 FAM83HQ6ZRV2 1179 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 SLC44A3Q8N4M1 653 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 COL26A1Q96A83 441 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 ZG16BQ96DA0 208 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 EXOSC3Q9NQT5 275 aaKnown RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 SIRT3Q9NTG7 399 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 COA4Q9NYJ1 87 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 GNB5O14775 395 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 KRT33AO76009 404 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 SERPINA3P01011 423 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 ATP1B1P05026 303 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 CLTBP09497 229 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 H2BFSP57053 126 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 AP3S2P59780 193 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 S100A12P80511 92 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 C2orf68Q2NKX9 166 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 RAB11FIP2Q7L804 512 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 NAXDQ8IW45 347 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 CFAP206Q8IYR0 622 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 SLC22A12Q96S37 553 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 CMSS1Q9BQ75 279 aaKnown RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 SLC19A3Q9BZV2 496 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.11□□□□□ -0.15
PMS1-221ENST00000624204 ANKRD19PQ9H560 264 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 SUV39H2Q9H5I1 410 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 BIN3Q9NQY0 253 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 NDRG3Q9UGV2 375 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 OPN4Q9UHM6 478 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 GPR55Q9Y2T6 319 aaPredicted RBP14.11□□□□□ -0.15
PMS1-221ENST00000624204 OR51B4Q9Y5P0 310 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 NPFFR2Q9Y5X5 522 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
PMS1-221ENST00000624204 OR2M5A3KFT3 312 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms