RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FGD3Q5JSP0 725 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 COLEC12Q5KU26 742 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 INO80CQ6PI98 192 aaPredicted RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 OFCC1Q8IZS5 231 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 PIK3C3Q8NEB9 887 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 EME1Q96AY2 570 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 SLC41A3Q96GZ6 507 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 SIGLEC12Q96PQ1 595 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 EPYCQ99645 322 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 CIB1Q99828 191 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 HHATLQ9HCP6 504 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 MED11Q9P086 117 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 RPS6KB2Q9UBS0 482 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 OAZ3Q9UMX2 235 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 TRAPPC13A5PLN9 417 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 OR5H15A6NDH6 313 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 SLC25A12O75746 678 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 NEURL1O76050 574 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 IDH2P48735 452 aaKnown RBP16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 MASP1P48740 699 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 UCNP55089 124 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 TMPRSS3P57727 454 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 ARG2P78540 354 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 ST3GAL3Q11203 375 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 CBFBQ13951 182 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 GDF7Q7Z4P5 450 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 TMEM179BQ7Z7N9 219 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 OR5K1Q8NHB7 308 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF563Q8TA94 476 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 RNF217Q8TC41 542 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 DHRS1Q96LJ7 313 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 KLHDC3Q9BQ90 382 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 RNF32Q9H0A6 362 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 PROK2Q9HC23 129 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 SLC7A7Q9UM01 511 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 HRH3Q9Y5N1 445 aa16.24■□□□□ 0.19
PTCHD3-202ENST00000622555 ZFHX4Q86UP3 3567 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A1B0GWA3 101 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 GNB5O14775 395 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 SMNDC1O75940 238 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 PGCP20142 388 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 FPR1P21462 350 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 MSX1P28360 303 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 ARHGDIAP52565 204 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 SUMO3P55854 103 aaPredicted RBP16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 INPP5JQ15735 1006 aaPredicted RBP16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 EXOC3L2Q2M3D2 409 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF613Q6PF04 617 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 ZDHHC13Q8IUH4 622 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 EPHX4Q8IUS5 362 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 SVOPLQ8N434 492 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 LSMEM1Q8N8F7 131 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 SDCCAG3Q96C92 435 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 JSRP1Q96MG2 331 aaPredicted RBP16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 FRMD6Q96NE9 622 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 DSN1Q9H410 356 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 RAB26Q9ULW5 256 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 PTPRQQ9UMZ3 2332 aa16.23■□□□□ 0.19
PTCHD3-202ENST00000622555 IGLV3-32A0A0A0MS00 114 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A0G2JMM0 328 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A1W2PPB8 328 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A1W2PRQ8 180 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A1W2PRS3 328 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 ANKUB1A6NFN9 424 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 KIR3DP1A8MWS1 328 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 G3V2T6 193 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 FAAHO00519 579 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 CDC40O60508 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 SNX4O95219 450 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 THY1P04216 161 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 DNASE1L1P49184 302 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 DGCR6Q14129 220 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 LAPTM4AQ15012 233 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TRAM2Q15035 370 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 WBP2NLQ6ICG8 309 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 SHQ1Q6PI26 577 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 HS3ST5Q8IZT8 346 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 OR4K17Q8NGC6 315 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 OR4C15Q8NGM1 316 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 GPR119Q8TDV5 335 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 HAS2Q92819 552 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 ALPK1Q96QP1 1244 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 MAN2C1Q9NTJ4 1040 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 SELENONQ9NZV5 590 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TMCC3Q9ULS5 477 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 MAGED1Q9Y5V3 778 aaPredicted RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TNRC6AQ8NDV7 1962 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A0B4J2E0 115 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TRBV4-1A0A0J9YWV2 114 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 A0A1B0GX12 115 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 B4DXG7 233 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 PDLIM1O00151 329 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 SNPHO15079 494 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 THRBP10828 461 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 CNR1P21554 472 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 ELAVL4P26378 380 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 HMGA2P52926 109 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 GPR85P60893 370 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms