RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SLC16A11Q8NCK7 471 aa15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 SPATA4Q8NEY3 305 aa15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 NUP43Q8NFH3 380 aa15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 ZFP28Q8NHY6 868 aa15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 JADE3Q92613 823 aa15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 OTUB1Q96FW1 271 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-215ENST00000612795 VWC2LB2RUY7 222 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 CYTIPO60759 359 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 HSPA4LO95757 839 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 IGHV3-9P01782 118 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 ALOX5P09917 674 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 ITGA2P17301 1181 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 CFPP27918 469 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 SERPINB9P50453 376 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 RNF144AP50876 292 aaPredicted RBP15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 P2RX1P51575 399 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 LCP2Q13094 533 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 TRADDQ15628 312 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 IQCCQ4KMZ1 466 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 MTERF4Q7Z6M4 381 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 ZNF527Q8NB42 609 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 CHMP6Q96FZ7 201 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 C1orf159Q96HA4 380 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 FKRPQ9H9S5 495 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 NTMQ9P121 344 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 WBP11Q9Y2W2 641 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 TRAF6Q9Y4K3 522 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 SLC25A15Q9Y619 301 aa15.13■□□□□ 0.01
CSNK1E-215ENST00000612795 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 ZNF724A8MTY0 619 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 PRKCAP17252 672 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 SRP14P37108 136 aaKnown RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 PKNOX1P55347 436 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 SUMO3P55854 103 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 POU6F2P78424 691 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 FBXW9Q5XUX1 488 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 CBLN3Q6UW01 205 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 TMCO5AQ8N6Q1 288 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 CIDECQ96AQ7 238 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 GIMAP5Q96F15 307 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 MRGPRX4Q96LA9 322 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 OR5B2Q96R09 309 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 PAFAH2Q99487 392 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 ADAM19Q9H013 955 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 EMC3Q9P0I2 261 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 CARD8Q9Y2G2 431 aa15.12■□□□□ 0.01
CSNK1E-215ENST00000612795 IGHV4-61A0A0C4DH41 118 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 TRIM49D1C9J1S8 452 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 H3BNH8 94 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 OIP5O43482 229 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 ATP6V1C1P21283 382 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 APOBEC3AP31941 199 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 TOMM34Q15785 309 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 ANKRD26P1Q6NSI1 321 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 C3orf33Q6P1S2 294 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 TMEM151AQ8N4L1 468 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 RFWD2Q8NHY2 731 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 FAM76AQ8TAV0 307 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 APH1AQ96BI3 265 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 ARL8AQ96BM9 186 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 FBXO17Q96EF6 278 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 C1QTNF6Q9BXI9 259 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 GIN1Q9NXP7 522 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 TAS2R16Q9NYV7 291 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 NINJ2Q9NZG7 142 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 ICAM5Q9UMF0 924 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 ACTL7BQ9Y614 415 aa15.11■□□□□ 0.01
CSNK1E-215ENST00000612795 NPIPA5A0A0B4J1W7 369 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 SERTM1A2A2V5 107 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 NPIPA7E9PJI5 369 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 GTPBP1O00178 669 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 NPIPA8P0DM63 369 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 CCR4P51679 360 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 SNRPD2P62316 118 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 PHC1P78364 1004 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 MLC1Q15049 377 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 NOXRED1Q6NXP6 359 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 BHLHB9Q6PI77 547 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 LRIG3Q6UXM1 1119 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 ZNF614Q8N883 585 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 ZNF75CPQ92670 426 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 SORCS2Q96PQ0 1159 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 BTBD2Q9BX70 525 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 MYOZ1Q9NP98 299 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 MID1IP1Q9NPA3 183 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 ASB6Q9NWX5 421 aa15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 NOSIPQ9Y314 301 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
CSNK1E-215ENST00000612795 LOC390937A0A1W2PQ73 354 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 RSL1D1O76021 490 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 ZNF23P17027 643 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 IMPDH1P20839 514 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 ATP5F1P24539 256 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 NDUFAF6Q330K2 333 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 OR7E24Q6IFN5 339 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 ZCCHC12Q6PEW1 402 aa15.09■□□□□ 0.01
CSNK1E-215ENST00000612795 SLC22A9Q8IVM8 553 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms