RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 STX7O15400 261 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 PGK1P00558 417 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 S100A6P06703 90 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 ASNSP08243 561 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 FGF4P08620 206 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 HBQ1P09105 142 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 PRG2P13727 222 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 KLK2P20151 261 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 GLRA2P23416 452 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 CHMLP26374 656 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 RPL32P62910 135 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 VLDLRP98155 873 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 DOC2AQ14183 400 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 ATXN7L3Q14CW9 347 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 CCDC57Q2TAC2 916 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF658Q5TYW1 1059 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 CENPQQ7L2Z9 268 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 ARMCX2Q7L311 632 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 DPY19L4Q7Z388 723 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 TMEM17Q86X19 198 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 APOBEC3FQ8IUX4 373 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 FBXL16Q8N461 479 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 OR2T33Q8NG76 320 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 OR9A4Q8NGU2 314 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 OR10T2Q8NGX3 314 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 LILRB4Q8NHJ6 448 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 NANPQ8TBE9 248 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 M1APQ8TC57 530 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 IL1F10Q8WWZ1 152 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 FAF2Q96CS3 445 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 EDEM2Q9BV94 578 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 GORASP2Q9H8Y8 452 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 PARVGQ9HBI0 331 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 TMOD2Q9NZR1 351 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 ANAPC7Q9UJX3 599 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 MAB21L2Q9Y586 359 aa3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 SF3B1O75533 1304 aaKnown RBP eCLIP3.16□□□□□ -1.9
SMCHD1-213ENST00000609587 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.9
SMCHD1-213ENST00000609587 IGLV8-61A0A075B6I0 122 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 PPIAL4CA0A0B4J2A2 164 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KLF18A0A0U1RQI7 1052 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 LOC100653049A0A140TA62 436 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 ESYT2A0FGR8 921 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 OR6C65A6NJZ3 312 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 LATO43561 262 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 SCRG1O75711 98 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 IDH1O75874 414 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KRT34O76011 436 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 OPN1LWP04000 364 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 S100A9P06702 114 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF853P0CG23 659 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 PPIAL4GP0DN37 164 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 CLUP10909 449 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 EPB41P11171 864 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 BDKRB1P46663 353 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 ACADVLP49748 655 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 P2RY4P51582 365 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 AP3M2P53677 418 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 UBE2HP62256 183 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 IL24Q13007 206 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 DPYSL3Q14195 570 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KIAA0040Q15053 153 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 USH1GQ495M9 461 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 PAGE2BQ5JRK9 111 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 FAM120AOSQ5T036 256 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 C1orf185Q5T7R7 199 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 AP1ARQ63HQ0 302 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 NCR3LG1Q68D85 454 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 PVRIGQ6DKI7 326 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 VASH2Q86V25 355 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 SERPINA9Q86WD7 417 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF584Q8IVC4 421 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 NKAIN4Q8IVV8 208 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF679Q8IYX0 411 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 BBOF1Q8ND07 529 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 OR2T34Q8NGX1 318 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 RAPGEF5Q92565 580 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 PSMG2Q969U7 264 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 C4orf36Q96KX1 117 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KIR2DL4Q99706 377 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC77Q9BR77 488 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 TPPP3Q9BW30 176 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 POLR1EQ9GZS1 481 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 VNN3Q9NY84 501 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 APOBEC3BQ9UH17 382 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 CLEC4EQ9ULY5 219 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 SAMD4AQ9UPU9 718 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 FLVCR1Q9Y5Y0 555 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 V9GYY5 206 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 GAKO14976 1311 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 KIF16BQ96L93 1317 aa3.15□□□□□ -1.91
SMCHD1-213ENST00000609587 GSAPA4D1B5 854 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 CDX4O14627 284 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 TNFSF11O14788 317 aa3.14□□□□□ -1.91
SMCHD1-213ENST00000609587 EFNA2O43921 213 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms