RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KCNJ10P78508 379 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 FOXF1Q12946 379 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 FOXF2Q12947 444 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 CBFBQ13951 182 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 SLC25A53Q5H9E4 307 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 SLC38A5Q8WUX1 472 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 FIG4Q92562 907 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 ADGRG7Q96K78 797 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 MRGPRX4Q96LA9 322 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 PINK1Q9BXM7 581 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 RAD21L1Q9H4I0 556 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.05■□□□□ -0
SSBP4-204ENST00000597724 ZNF175Q9Y473 711 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 GMEB1Q9Y692 573 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 FBN2P35556 2912 aa15.05■□□□□ -0
SSBP4-204ENST00000597724 ABCA12Q86UK0 2595 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 TRBV5-3A0A0A0MS03 114 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 CLDN24A6NM45 220 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 EIF1AYO14602 144 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 ADAMDEC1O15204 470 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 OPN1LWP04000 364 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 SNRPB2P08579 225 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 BMP2P12643 396 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 PGCP20142 388 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 RPS4Y1P22090 263 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 ME2P23368 584 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 ELK4P28324 431 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 AGFG1P52594 562 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 PLAURQ03405 335 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 FADDQ13158 208 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 QPRTQ15274 297 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 CTU2Q2VPK5 515 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 MEX3BQ6ZN04 569 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 ESPNLQ6ZVH7 1005 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 CMIPQ8IY22 773 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 GCNT2Q8N0V5 402 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 LILRA2Q8N149 483 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 TSPEARQ8WU66 669 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 INTS12Q96CB8 462 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 ZNF845Q96IR2 970 aaPredicted RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 EXOSC3Q9NQT5 275 aaKnown RBP15.04■□□□□ -0
SSBP4-204ENST00000597724 CALML5Q9NZT1 146 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 VAPAQ9P0L0 249 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 NDUFAF1Q9Y375 327 aa15.04■□□□□ -0
SSBP4-204ENST00000597724 DSPPQ9NZW4 1301 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 A0A0J9YW62 118 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 SYT5O00445 386 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 BCHEP06276 602 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 DBIP07108 87 aaKnown RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 NUDT7P0C024 238 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 IL7RP16871 459 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 PPIBP23284 216 aaKnown RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 EIF1AXP47813 144 aaKnown RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 ASCL1P50553 236 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 ARFIP2P53365 341 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 CRISP3P54108 245 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 PON3Q15166 354 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 SGCBQ16585 318 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 OR2A2Q6IF42 318 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 DLEU7Q6UYE1 221 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 P4HA3Q7Z4N8 544 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 OR10D3Q8NH80 312 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 FNDC9Q8TBE3 224 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 WDR60Q8WVS4 1066 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 ST8SIA1Q92185 356 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 CNOT9Q92600 299 aaKnown RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 KLHL15Q96M94 604 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 SFXN3Q9BWM7 321 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 TMEM185BQ9H7F4 350 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 PAQR5Q9NXK6 330 aaPredicted RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 JKAMPQ9P055 326 aa15.03■□□□□ -0
SSBP4-204ENST00000597724 LEF1Q9UJU2 399 aaPredicted RBP15.03■□□□□ -0
SSBP4-204ENST00000597724 A0A0G2JPF8 293 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 TMEM247A6NEH6 219 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 HNRNPCL2B2RXH8 293 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 HNRNPCL3B7ZW38 293 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 HNRNPCL1O60812 293 aaKnown RBP15.02■□□□□ -0
SSBP4-204ENST00000597724 CRHP06850 196 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 HNRNPCL4P0DMR1 293 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 PRF1P14222 555 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 NID1P14543 1247 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 SHC1P29353 583 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 SFTPDP35247 375 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 DLX5P56178 289 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 SESN3P58005 492 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 EEF1A1P68104 462 aaKnown RBP15.02■□□□□ -0
SSBP4-204ENST00000597724 SF3A3Q12874 501 aaKnown RBP eCLIP15.02■□□□□ -02e-6■■□□□ 13.6
SSBP4-204ENST00000597724 GNA13Q14344 377 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 FBXL19-AS1Q494R0 122 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 EEF1A1P5Q5VTE0 462 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 MCEMP1Q8IX19 187 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 DMRTC2Q8IXT2 367 aaPredicted RBP15.02■□□□□ -0
SSBP4-204ENST00000597724 PEX5LQ8IYB4 626 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 DPP10Q8N608 796 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 OR2V1Q8NHB1 315 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 MAL2Q969L2 176 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 TMEM19Q96HH6 336 aa15.02■□□□□ -0
SSBP4-204ENST00000597724 ZNF317Q96PQ6 595 aaPredicted RBP15.02■□□□□ -0
SSBP4-204ENST00000597724 RNF122Q9H9V4 155 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms