RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TOMM34Q15785 309 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 TMEM44Q2T9K0 475 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 ZNF311Q5JNZ3 666 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 B3GNT6Q6ZMB0 384 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 ZNF836Q6ZNA1 936 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 NCCRP1Q6ZVX7 275 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 PTOV1Q86YD1 416 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 UBQLNLQ8IYU4 475 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 ZNF563Q8TA94 476 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 PHF10Q8WUB8 498 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 DMRTA2Q96SC8 542 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 SPATA5L1Q9BVQ7 753 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 PIF1Q9H611 641 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 ARMC7Q9H6L4 198 aa17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 EXOSC3Q9NQT5 275 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 GPC6Q9Y625 555 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-214ENST00000597396 KIAA1549Q9HCM3 1950 aa17.77■□□□□ 0.43
SHKBP1-214ENST00000597396 ZG16O60844 167 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 PABPC4LP0CB38 370 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ZNF708P17019 499 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SLC6A8P48029 635 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 NUDT2P50583 147 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SMSP52788 366 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 CLDN18P56856 261 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ADRM1Q16186 407 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 BCL2A1Q16548 175 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ZSWIM7Q19AV6 140 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 NET1Q7Z628 596 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ARPINQ7Z6K5 226 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SERPINA11Q86U17 422 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SLC30A8Q8IWU4 369 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ZZZ3Q8IYH5 903 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 RPRMLQ8N4K4 120 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 MEIOBQ8N635 442 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ANKS4BQ8N8V4 417 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 CCDC197Q8NCU1 140 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 FBXO27Q8NI29 283 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 TMEM234Q8WY98 164 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 ZNF607Q96SK3 696 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 NPAS1Q99742 590 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SPATA9Q9BWV2 254 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 DNAJB12Q9NXW2 375 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 FAM215AQ9Y5M1 114 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 AP4B1Q9Y6B7 739 aa17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 SPTBN1Q01082 2364 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-214ENST00000597396 MED12LQ86YW9 2145 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 SEC14L5O43304 696 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 PRKCAP17252 672 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ME2P23368 584 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ADH6P28332 368 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 AQP1P29972 269 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 NUP107P57740 925 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ADORA2A-AS1P86434 159 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ACSF3Q4G176 576 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 RNF220Q5VTB9 566 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 RTL6Q6ICC9 239 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 RPTNQ6XPR3 784 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 CHMP1BQ7LBR1 199 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ZNF440Q8IYI8 595 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 POC1BQ8TC44 478 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 ST8SIA1Q92185 356 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 MRGPRX4Q96LA9 322 aa17.75■□□□□ 0.43
SHKBP1-214ENST00000597396 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 CDHR4A6H8M9 788 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 SERPINB7O75635 380 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 RNF224P0DH78 156 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 UQCRBP14927 111 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 ELK4P28324 431 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 PCGF2P35227 344 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 EEFSECP57772 596 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 EEF1A1P68104 462 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 PLAURQ03405 335 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 PMPCAQ10713 525 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 INTS11Q5TA45 600 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 HACD2Q6Y1H2 254 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 MARVELD2Q8N4S9 558 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 OR10Q1Q8NGQ4 319 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 ZPLD1Q8TCW7 415 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 RND1Q92730 232 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 TRIB1Q96RU8 372 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 TUBA1CQ9BQE3 449 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 TTYH2Q9BSA4 534 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 RLIMQ9NVW2 624 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 AP3M1Q9Y2T2 418 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 MPDZO75970 2070 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 CACNA1CQ13936 2221 aa17.74■□□□□ 0.43
SHKBP1-214ENST00000597396 CFAP73A6NFT4 308 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 NDUFAB1O14561 156 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 DNAJA2O60884 412 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 EPPINO95925 133 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 GLI4P10075 376 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 PSMA4P25789 261 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 CPA2P48052 419 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 GZMMP51124 257 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 SESN3P58005 492 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 RPS3AP61247 264 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 RAC1P63000 192 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 VMACQ2NL98 169 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 SLC25A53Q5H9E4 307 aa17.73■□□□□ 0.43
SHKBP1-214ENST00000597396 ERICH5Q6P6B1 374 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms