RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FN1P02751 2386 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 EXPH5Q8NEV8 1989 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CDHR4A6H8M9 788 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ALG1L2C9J202 215 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 TPST1O60507 370 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 FKBP6O75344 327 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CYP7B1O75881 506 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ANGPTL1O95841 491 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 FABP3P05413 133 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 UBTFL6P0CB48 400 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 UQCRBP14927 111 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ITGA2P17301 1181 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC7A1P30825 629 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ST13P50502 369 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 SNTA1Q13424 505 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 TUBA3CQ13748 450 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 DUSP7Q16829 419 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC22A10Q63ZE4 541 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 TUBA3EQ6PEY2 450 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 IGFL3Q6UXB1 125 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 MARCH3Q86UD3 253 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 RANBP3LQ86VV4 465 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CYP4Z1Q86W10 505 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CARM1Q86X55 608 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 GPR32P1Q8NGA4 272 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 GRHL3Q8TE85 626 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 PAQR8Q8TEZ7 354 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 PYDC1Q8WXC3 89 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 TM9SF4Q92544 642 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ARHGDIGQ99819 225 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 RNF32Q9H0A6 362 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF552Q9H707 407 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 AGPAT4Q9NRZ5 378 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 SACM1LQ9NTJ5 587 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 PPP4R1LQ9P1A2 415 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 LRFN1Q9P244 771 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 AP4S1Q9Y587 144 aa10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 CHCHD2Q9Y6H1 151 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-213ENST00000597325 ANK2Q01484 3957 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 MXRA5Q9NR99 2828 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 OR5H15A6NDH6 313 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 hCG_2039718K7EN88 272 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 M0R3H8 397 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 AP3D1O14617 1153 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF264O43296 627 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 HCRTR2O43614 444 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 FADS1O60427 444 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC25A12O75746 678 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 WDPCPO95876 746 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 LGI1O95970 557 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 F10P00742 488 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CCL3P10147 92 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 FCGR1AP12314 374 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 EDN3P14138 238 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 TNFRSF1BP20333 461 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CD96P40200 585 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 ADH7P40394 386 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CASP3P42574 277 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 OR1E2P47887 323 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 MASP1P48740 699 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CCR4P51679 360 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 OR1C1Q15619 314 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CD226Q15762 336 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 NRF1Q16656 503 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF468Q5VIY5 522 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 PRAMEF20Q5VT98 475 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 FNDC7Q5VTL7 733 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC30A6Q6NXT4 461 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 TMEM81Q6P7N7 255 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 AAGABQ6PD74 315 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 DEF8Q6ZN54 512 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 Q6ZS92 163 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF550Q7Z398 422 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 TGIF2LYQ8IUE0 185 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 GRAMD2AQ8IUY3 354 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 ZDHHC21Q8IVQ6 265 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CLIP4Q8N3C7 705 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 PSD4Q8NDX1 1056 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC35B4Q969S0 331 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 DUS3LQ96G46 650 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 MCCC2Q9HCC0 563 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 GALNT9Q9HCQ5 603 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 DLL4Q9NR61 685 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 CCM2LQ9NUG4 571 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 RLIMQ9NVW2 624 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 FAM32AQ9Y421 112 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 WIF1Q9Y5W5 379 aa10.98□□□□□ -0.65
SHKBP1-213ENST00000597325 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 FAM47E-STBD1D6RA91 191 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 FRS3O43559 492 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 EIF4E2O60573 245 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 KRT36O76013 467 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 SNX4O95219 450 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 NUDT14O95848 222 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 MT-ND1P03886 318 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms