RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ALOX5P09917 674 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 ELK4P28324 431 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 CDKN1AP38936 164 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 RPL3P39023 403 aaKnown RBP13.12□□□□□ -0.31
PNKP-202ENST00000593706 SLC1A6P48664 564 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 KRTAP1-1Q07627 177 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 BST1Q10588 318 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 FOXF1Q12946 379 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 RNPS1Q15287 305 aaKnown RBP13.12□□□□□ -0.31
PNKP-202ENST00000593706 TSC22D1Q15714 1073 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 DUSP5Q16690 384 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 CCNJQ5T5M9 372 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 ZAR1Q86SH2 424 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 C16orf58Q96GQ5 468 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 AKTIPQ9H8T0 292 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 FBXO34Q9NWN3 711 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 KLHL13Q9P2N7 655 aa13.12□□□□□ -0.31
PNKP-202ENST00000593706 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 A0A1W2PP18 115 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 SNNO75324 88 aaPredicted RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 SOX30O94993 753 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 LCN1P31025 176 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 IDUAP35475 653 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 PRIM2P49643 509 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 CLDN8P56748 225 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 FAPQ12884 760 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 ZCCHC12Q6PEW1 402 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 GABRG1Q8N1C3 465 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 POC1BQ8TC44 478 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 PHOSPHO1Q8TCT1 267 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 POTEKPQ9BYX7 375 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 CXorf36Q9H7Y0 433 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 KCNK9Q9NPC2 374 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 GPATCH2Q9NW75 528 aa13.11□□□□□ -0.31
PNKP-202ENST00000593706 NOP53Q9NZM5 478 aaKnown RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 MAGED1Q9Y5V3 778 aaPredicted RBP13.11□□□□□ -0.31
PNKP-202ENST00000593706 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 GJE1A6NN92 205 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 NTN1O95631 604 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 C6orf47O95873 294 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 HMGN2P05204 90 aaKnown RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 SOD3P08294 240 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 LINGO3P0C6S8 592 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 DDX5P17844 614 aaKnown RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 SHC1P29353 583 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 RNF144AP50876 292 aaPredicted RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 ZNF117Q03924 483 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 MAD2L1Q13257 205 aaPredicted RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 STX3Q13277 289 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 TAB1Q15750 504 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 CD226Q15762 336 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 NCMAPQ5T1S8 102 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 SFRP5Q5T4F7 317 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 HEPHL1Q6MZM0 1159 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 ADAM5Q6NVV9 412 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 KIRREL3Q8IZU9 778 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 SMAP2Q8WU79 429 aaPredicted RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 CDS1Q92903 461 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 KLHDC3Q9BQ90 382 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 BTBD2Q9BX70 525 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 REG4Q9BYZ8 158 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 ALG2Q9H553 416 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 TMBIM4Q9HC24 238 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 ZCCHC3Q9NUD5 404 aaKnown RBP13.1□□□□□ -0.31
PNKP-202ENST00000593706 ATAD3AQ9NVI7 634 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 PNPOQ9NVS9 261 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 GIN1Q9NXP7 522 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
PNKP-202ENST00000593706 OVOL3O00110 214 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 SCN2BO60939 215 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ERLIN1O75477 346 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ADAP00813 363 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 FESP07332 822 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 DANCRP0C864 163 aa13.09□□□□□ -0.31
PNKP-202ENST00000593706 ADH6P28332 368 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms