RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-217	ENST00000592905	P4HA3	Q7Z4N8	544 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	DHDDS	Q86SQ9	333 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	VRK2	Q86Y07	508 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	GCNT2	Q8N0V5	402 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	LILRA2	Q8N149	483 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	WDR60	Q8WVS4	1066 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	C10orf82	Q8WW14	230 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	FIG4	Q92562	907 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	INTS12	Q96CB8	462 aa	Known RBP	13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	RAD21L1	Q9H4I0	556 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	RLIM	Q9NVW2	624 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	SLC35A3	Q9Y2D2	325 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	ABCA12	Q86UK0	2595 aa		13.63	□□□□□ -0.23
ERCC1-217	ENST00000592905	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905		A0A0J9YW62	118 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	SLC22A20	A6NK97	555 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	FBP2	O00757	339 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	TNFSF11	O14788	317 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	ADAM11	O75078	769 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	DBI	P07108	87 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	RPS4Y1	P22090	263 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	SFTPD	P35247	375 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	EIF1	P41567	113 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	EIF1AX	P47813	144 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	CRISP3	P54108	245 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	EEFSEC	P57772	596 aa	Known RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	RAC1	P63000	192 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	FADD	Q13158	208 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	SGCB	Q16585	318 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	RUNDC3A	Q59EK9	446 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	POMZP3	Q6PJE2	187 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	PEX5L	Q8IYB4	626 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	RELL2	Q8NC24	303 aa	Predicted RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	FAM71C	Q8NEG0	241 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	OR52P1P	Q8NH57	321 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	NFKBID	Q8NI38	313 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	WNT2B	Q93097	391 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	UCN2	Q96RP3	112 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	TREX2	Q9BQ50	279 aa	Predicted RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	FAM107B	Q9H098	131 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	A4GALT	Q9NPC4	353 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	CHST11	Q9NPF2	352 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	ARMCX1	Q9P291	453 aa		13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	GPC6	Q9Y625	555 aa	Predicted RBP	13.62	□□□□□ -0.23
ERCC1-217	ENST00000592905	APC	P25054	2843 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	LOC100653049	A0A140TA62	436 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	TMEM247	A6NEH6	219 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	EVPLL	A8MZ36	301 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	C5orf58	C9J3I9	102 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	DYNC1I1	O14576	645 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	AP3D1	O14617	1153 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CXCL13	O43927	109 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	KRT34	O76011	436 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	RCBTB2	O95199	551 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	BMP2	P12643	396 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	PGC	P20142	388 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	ME2	P23368	584 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CTSS	P25774	331 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	SESN3	P58005	492 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	MTPN	P58546	118 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	RPS3A	P61247	264 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	TFF3	Q07654	80 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	NFYC	Q13952	458 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CAPRIN1	Q14444	709 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	PON3	Q15166	354 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CTU2	Q2VPK5	515 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	GCNT6	Q5T4J0	391 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	MRPL2	Q5T653	305 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	ZNF836	Q6ZNA1	936 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	DPP10	Q8N608	796 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	METTL25	Q8N6Q8	603 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	OR10D3	Q8NH80	312 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	ZNF563	Q8TA94	476 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	FNDC9	Q8TBE3	224 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	ADGRG7	Q96K78	797 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CGREF1	Q99674	301 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	TM9SF2	Q99805	663 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	ELAC2	Q9BQ52	826 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	THUMPD1	Q9NXG2	353 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	DNAJB12	Q9NXW2	375 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	CALML5	Q9NZT1	146 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	STOML1	Q9UBI4	398 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	DSPP	Q9NZW4	1301 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	LRBA	P50851	2863 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	NOTCH2	Q04721	2471 aa		13.61	□□□□□ -0.23
ERCC1-217	ENST00000592905	MAST4	O15021	2626 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	MPDZ	O75970	2070 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905		A0A0G2JPF8	293 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	HNRNPCL2	B2RXH8	293 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	HNRNPCL3	B7ZW38	293 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	DVL2	O14641	736 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	HNRNPCL1	O60812	293 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	DNAJA2	O60884	412 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	PGM3	O95394	542 aa		13.6	□□□□□ -0.23
ERCC1-217	ENST00000592905	NTN1	O95631	604 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms