RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 FAM107BQ9H098 131 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 MTHFD2LQ9H903 347 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 CALHM2Q9HA72 323 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 TMEM45AQ9NWC5 275 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 COQ3Q9NZJ6 369 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 KLHL14Q9P2G3 628 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 P2RX2Q9UBL9 471 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 NDUFAF1Q9Y375 327 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 CHST2Q9Y4C5 530 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 FREM1Q5H8C1 2179 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 PRR14LQ5THK1 2151 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 LOC100653049A0A140TA62 436 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 C7orf72A4D263 438 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 MBD3L4A6NDZ8 208 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 MBD3L3A6NE82 208 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 MBD3L5A6NJ08 208 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 EIF1AYO14602 144 aaKnown RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 TNFSF11O14788 317 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 DNAJA2O60884 412 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 KRT34O76011 436 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 NTN1O95631 604 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 GKN3PP0CG01 181 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 BMP2P12643 396 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 PRG2P13727 222 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ZNF17P17021 662 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 KLK2P20151 261 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 DRD4P21917 467 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 BMP5P22003 454 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 SFTPDP35247 375 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ANXA11P50995 505 aaKnown RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 SESN3P58005 492 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 MTPNP58546 118 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 NFYCQ13952 458 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ADRM1Q16186 407 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 GCNT6Q5T4J0 391 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ZNF836Q6ZNA1 936 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 COMTD1Q86VU5 262 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 SNX32Q86XE0 403 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 DPP10Q8N608 796 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 POU5F2Q8N7G0 328 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 OR52P1PQ8NH57 321 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 MBD3L2Q8NHZ7 208 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 FNDC9Q8TBE3 224 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ASB5Q8WWX0 329 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ZBTB8AQ96BR9 441 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 INTS12Q96CB8 462 aaKnown RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 DNAJA3Q96EY1 480 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ADGRG7Q96K78 797 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 CGREF1Q99674 301 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 PINK1Q9BXM7 581 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 A4GALTQ9NPC4 353 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 DNAJB12Q9NXW2 375 aaKnown RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 KLF2Q9Y5W3 355 aaPredicted RBP10.36□□□□□ -0.75
VMP1-211ENST00000591315 AP4B1Q9Y6B7 739 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 SPG11Q96JI7 2443 aa10.36□□□□□ -0.75
VMP1-211ENST00000591315 DSPPQ9NZW4 1301 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 ABCA4P78363 2273 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 FAM47E-STBD1D6RA91 191 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 FXYD1O00168 92 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 DYNC1I1O14576 645 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 ANGPT2O15123 496 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 FRS3O43559 492 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 CXCL13O43927 109 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 AQP8O94778 261 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 IL2RAP01589 272 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 ARAFP10398 606 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 PRF1P14222 555 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 LSP1P33241 339 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 TIMP3P35625 211 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 EIF1AXP47813 144 aaKnown RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 SUMO3P55854 103 aaPredicted RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 DLX5P56178 289 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 IRX1P78414 480 aaPredicted RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 TXNL4AP83876 142 aaKnown RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 HOXC5Q00444 222 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 TMEM176BQ3YBM2 270 aaPredicted RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 MRPL2Q5T653 305 aaKnown RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 PPP4R4Q6NUP7 873 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 PTOV1Q86YD1 416 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 TREML1Q86YW5 311 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 GRAMD2AQ8IUY3 354 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 MEIOBQ8N635 442 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 TOR1AIP2Q8NFQ8 470 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 OR10D3Q8NH80 312 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 WNT2BQ93097 391 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 ANKRD27Q96NW4 1050 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 SRXN1Q9BYN0 137 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 PIF1Q9H611 641 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 KCNJ16Q9NPI9 418 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 CLEC4AQ9UMR7 237 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 USP22Q9UPT9 525 aa10.35□□□□□ -0.75
VMP1-211ENST00000591315 ZNF443Q9Y2A4 671 aaPredicted RBP10.35□□□□□ -0.75
VMP1-211ENST00000591315 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms