RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.75■□□□□ 0.43
CIRBP-220ENST00000588917 MAGEL2Q9UJ55 1249 aa17.75■□□□□ 0.43
CIRBP-220ENST00000588917 VDAC3Q9Y277 283 aa17.75■□□□□ 0.43
CIRBP-220ENST00000588917 EML6Q6ZMW3 1958 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 CLEC18AA5D8T8 446 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 C17orf51A8MQB3 221 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 B4DXG7 233 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 BCKDKO14874 412 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 OIP5O43482 229 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 LGI1O95970 557 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 ZNF17P17021 662 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 GGT1P19440 569 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 ME2P23368 584 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 RYKP34925 604 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 PTGS2P35354 604 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 HTR3AP46098 478 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 FXNQ16595 210 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 DUSP7Q16829 419 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 PLPPR5Q32ZL2 321 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 NDUFAF6Q330K2 333 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 RAET1LQ5VY80 246 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 ARSKQ6UWY0 536 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 CLEC18BQ6UXF7 455 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 GTPBP8Q8N3Z3 284 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-220ENST00000588917 SMYD1Q8NB12 490 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 CLEC18CQ8NCF0 446 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 PROX1Q92786 737 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 ABTB1Q969K4 478 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-220ENST00000588917 FAM162AQ96A26 154 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 TAMM41Q96BW9 452 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 SLC7A6OSQ96CW6 309 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-220ENST00000588917 MRGPRX4Q96LA9 322 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 SFXN2Q96NB2 322 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 MUC13Q9H3R2 512 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 RPS6KA6Q9UK32 745 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 HRH3Q9Y5N1 445 aa17.74■□□□□ 0.43
CIRBP-220ENST00000588917 NINQ8N4C6 2090 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 A0A1B0GTH9 108 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 TPST1O60507 370 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 STAMBPO95630 424 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 FESP07332 822 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 GP1BBP13224 206 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 TCN1P20061 433 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 FKBP2P26885 142 aaKnown RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 IDH2P48735 452 aaKnown RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 EPS8Q12929 822 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 CEACAM7Q14002 265 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 QPRTQ15274 297 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 SF3B4Q15427 424 aaKnown RBP eCLIP17.73■□□□□ 0.431e-11■■■■■ 56.7
CIRBP-220ENST00000588917 BCL2A1Q16548 175 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 LRRC23Q53EV4 343 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 CYBRD1Q53TN4 286 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 SLC25A53Q5H9E4 307 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 VASNQ6EMK4 673 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 EID3Q8N140 333 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 POP5Q969H6 163 aaKnown RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 THTPAQ9BU02 230 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 SLC6A15Q9H2J7 730 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 MMADHCQ9H3L0 296 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 SERINC1Q9NRX5 453 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 ACER3Q9NUN7 267 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 EGFL7Q9UHF1 273 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 ACAD8Q9UKU7 415 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 SLC9A8Q9Y2E8 581 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 RPH3AQ9Y2J0 694 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-220ENST00000588917 CHST2Q9Y4C5 530 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 AP4B1Q9Y6B7 739 aa17.73■□□□□ 0.43
CIRBP-220ENST00000588917 ETV2O00321 342 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 PRRG2O14669 202 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 DNAJC8O75937 253 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 OPN1SWP03999 348 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 PEPDP12955 493 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 ABOP16442 354 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 APOBEC1P41238 236 aaKnown RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 SLC1A3P43003 542 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 MAP2K6P52564 334 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 GFRA1P56159 465 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 TMEM44Q2T9K0 475 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 WLSQ5T9L3 541 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 RANBP3LQ86VV4 465 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 SPPL2CQ8IUH8 684 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 PM20D2Q8IYS1 436 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 FAM26EQ8N5C1 309 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 OR52E4Q8NGH9 312 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 TRIM2Q9C040 744 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 GMPR2Q9P2T1 348 aaKnown RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 SAMD4AQ9UPU9 718 aaKnown RBP17.72■□□□□ 0.43
CIRBP-220ENST00000588917 SNX13Q9Y5W8 968 aa17.72■□□□□ 0.43
CIRBP-220ENST00000588917 OR2M5A3KFT3 312 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GSC2O15499 205 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 BCAS1O75363 584 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 WISP2O76076 250 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 GKN3PP0CG01 181 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 PRKCAP17252 672 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 BMP7P18075 431 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 CD247P20963 164 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ELK4P28324 431 aa17.71■□□□□ 0.43
CIRBP-220ENST00000588917 ACAA2P42765 397 aaKnown RBP17.71■□□□□ 0.43
CIRBP-220ENST00000588917 CASP6P55212 293 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms