RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 EXT1Q16394 746 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PRSS53Q2L4Q9 553 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 SLC36A3Q495N2 470 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 KCTD21Q4G0X4 260 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 EIPR1Q53HC9 387 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 EMC4Q5J8M3 183 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 OTUD3Q5T2D3 398 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 C6orf52Q5T4I8 152 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 TMEM154Q6P9G4 183 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 UGT2A3Q6UWM9 527 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 Q71RC1 249 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 CDRT4Q8N9R6 151 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 OR5M9Q8NGP3 310 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 OR9A2Q8NGT5 310 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 FAM57AQ8TBR7 257 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 ELP5Q8TE02 316 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PHF10Q8WUB8 498 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 TAMM41Q96BW9 452 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 ITPKCQ96DU7 683 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 OR1F2PQ96R84 312 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 ZNF300Q96RE9 604 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 LPAR4Q99677 370 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PIP5K1AQ99755 562 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PSD2Q9BQI7 771 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 PINK1Q9BXM7 581 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 MRPS26Q9BYN8 205 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 POLR2J2Q9GZM3 115 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 FAM192AQ9GZU8 254 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 POLR2J3Q9H1A7 115 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 NTN4Q9HB63 628 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 NECTIN3Q9NQS3 549 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 DUSP22Q9NRW4 184 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 DEPPQ9NTK1 212 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 COQ3Q9NZJ6 369 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 NDUFA13Q9P0J0 144 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 C19orf53Q9UNZ5 99 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 MYRFQ9Y2G1 1151 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 IFT52Q9Y366 437 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 MMACHCQ9Y4U1 282 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 LIPGQ9Y5X9 500 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 GPC6Q9Y625 555 aaPredicted RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 HSPE1-MOB4S4R3N1 261 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 EXPH5Q8NEV8 1989 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 ANKHD1Q8IWZ3 2542 aaKnown RBP7.17□□□□□ -1.26
VMP1-204ENST00000587259 HCFC1P51610 2035 aa7.17□□□□□ -1.26
VMP1-204ENST00000587259 C7orf72A4D263 438 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 NPIPA2E9PIF3 369 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 NPIPA3F8WFD2 350 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 hCG_2039718K7EN88 272 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PDLIM1O00151 329 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CYR61O00622 381 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CTNSO60931 367 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 MFN2O95140 757 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 H6PDO95479 791 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 OXSR1O95747 527 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 THBS1P07996 1170 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ALOX5P09917 674 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 OR12D1P0DN82 309 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ANXA8P13928 327 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 NT5EP21589 574 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 MSX1P28360 303 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PRKAR1BP31321 381 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CYB561P49447 251 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PRKAG1P54619 331 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 SH3BGRP55822 239 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 DLX5P56178 289 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 MLF1P58340 268 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 TUBA4AP68366 448 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PSPHP78330 225 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 IGLV3-21P80748 117 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 VLDLRP98155 873 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 SPIBQ01892 262 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 SLC13A2Q13183 592 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 MYBPHQ13203 477 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 TOP3AQ13472 1001 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 KEAP1Q14145 624 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 LARS2Q15031 903 aaKnown RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 GPAT3Q53EU6 434 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ZNF628Q5EBL2 1059 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 HEPHL1Q6MZM0 1159 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 MFSD12Q6NUT3 480 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 VTCN1Q7Z7D3 282 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 LIX1LQ8IVB5 337 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 GALNT12Q8IXK2 581 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PEX5LQ8IYB4 626 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 C8orf59Q8N0T1 100 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 TAGAPQ8N103 731 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 FAM98AQ8NCA5 519 aaKnown RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 PLPP5Q8NEB5 264 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 TOR1AIP2Q8NFQ8 470 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 XAGE5Q8WWM1 108 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 CYGBQ8WWM9 190 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 RMND5BQ96G75 393 aaPredicted RBP7.16□□□□□ -1.26
VMP1-204ENST00000587259 C7orf34Q96L11 122 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 ART5Q96L15 291 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 PTCHD1Q96NR3 888 aa7.16□□□□□ -1.26
VMP1-204ENST00000587259 COL21A1Q96P44 957 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms