RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SELENONQ9NZV5 590 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 TP53TG5Q9Y2B4 290 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 HSPE1-MOB4S4R3N1 261 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 UBR5O95071 2799 aaPredicted RBP11.57□□□□□ -0.56
VMP1-202ENST00000585847 BOD1L1Q8NFC6 3051 aa11.57□□□□□ -0.56
VMP1-202ENST00000585847 SOCS2O14508 198 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 TP53I11O14683 189 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 TSPAN2O60636 221 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OR6B1O95007 311 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 F10P00742 488 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 CSTAP01040 98 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 IGKV1D-16P01601 117 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 ABCD3P28288 659 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SOX3P41225 446 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OR1E2P47887 323 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 MAP2K6P52564 334 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 MERTKQ12866 999 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SNTA1Q13424 505 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 KEAP1Q14145 624 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 ZNF791Q3KP31 576 aaPredicted RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 NHSL2Q5HYW2 709 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 CCNJQ5T5M9 372 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 KDM4DQ6B0I6 523 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OPN5Q6U736 354 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 IGFL3Q6UXB1 125 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 CD300LDQ6UXZ3 194 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 PLEKHM3Q6ZWE6 761 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 PRR22Q8IZ63 422 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 MARVELD2Q8N4S9 558 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 DHRSXQ8N5I4 330 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 RBMXL3Q8N7X1 1067 aaKnown RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 ATG16L2Q8NAA4 619 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 ZNF555Q8NEP9 628 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OR10G2Q8NGC3 310 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OR6T1Q8NGN1 323 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 MAGEE2Q8TD90 523 aaPredicted RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 TFAP2CQ92754 450 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 HAS2Q92819 552 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 OMA1Q96E52 524 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 DGCR6LQ9BY27 220 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 GABARAPL3Q9BY60 117 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SLC19A3Q9BZV2 496 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SH2D2AQ9NP31 389 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 SDHAF3Q9NRP4 125 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 KRT84Q9NSB2 600 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 ACER3Q9NUN7 267 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 DNAJB12Q9NXW2 375 aaKnown RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 STMN3Q9NZ72 180 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 PDP1Q9P0J1 537 aaPredicted RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 A4GNTQ9UNA3 340 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 TMEM5Q9Y2B1 443 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 YARS2Q9Y2Z4 477 aaKnown RBP11.56□□□□□ -0.56
VMP1-202ENST00000585847 AP4B1Q9Y6B7 739 aa11.56□□□□□ -0.56
VMP1-202ENST00000585847 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ADAM10O14672 748 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 UGT2B11O75310 529 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 REM1O75628 298 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 NEURL1O76050 574 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 UTS2O95399 124 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 FBXO45P0C2W1 286 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 UBL4AP11441 157 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 MSX1P28360 303 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 CAPGP40121 348 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 CD96P40200 585 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 UGT2B15P54855 530 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ESRRGP62508 458 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TUBA3CQ13748 450 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 OTUD3Q5T2D3 398 aaPredicted RBP11.55□□□□□ -0.56
VMP1-202ENST00000585847 PDZK1Q5T2W1 519 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ABHD17BQ5VST6 288 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TUBA3EQ6PEY2 450 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 C5orf46Q6UWT4 87 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TSEN54Q7Z6J9 526 aaKnown RBP11.55□□□□□ -0.56
VMP1-202ENST00000585847 ZAR1Q86SH2 424 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 MDS2Q8NDY4 140 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
VMP1-202ENST00000585847 RNF138Q8WVD3 245 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ACOT11Q8WXI4 607 aaPredicted RBP11.55□□□□□ -0.56
VMP1-202ENST00000585847 NTNG2Q96CW9 530 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 SIGLEC12Q96PQ1 595 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 MCHR1Q99705 422 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 PRRG3Q9BZD7 231 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TBL1XR1Q9BZK7 514 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 RNF32Q9H0A6 362 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ADNPQ9H2P0 1102 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 FBXO34Q9NWN3 711 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 ANKRD10Q9NXR5 420 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TUBD1Q9UJT1 453 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 TESMINQ9Y4I5 508 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 PCDHGB7Q9Y5F8 929 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 NPFFR2Q9Y5X5 522 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 NINQ8N4C6 2090 aa11.55□□□□□ -0.56
VMP1-202ENST00000585847 PCNX3Q9H6A9 2034 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 PRAMEF25A6NGN4 478 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 M0R3H8 397 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 SLC16A6O15403 523 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms