RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 RPS4Y1P22090 263 aaKnown RBP22.34■■□□□ 1.17
TTC39C-209ENST00000584250 SFTPDP35247 375 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 SLC6A8P48029 635 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 RAC1P63000 192 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 KCNJ10P78508 379 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 TXNL4AP83876 142 aaKnown RBP22.34■■□□□ 1.17
TTC39C-209ENST00000584250 PON3Q15166 354 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 DLEU7Q6UYE1 221 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 TM9SF2Q99805 663 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 TREX2Q9BQ50 279 aaPredicted RBP22.34■■□□□ 1.17
TTC39C-209ENST00000584250 SIKE1Q9BRV8 207 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 TMEM45AQ9NWC5 275 aa22.34■■□□□ 1.17
TTC39C-209ENST00000584250 ZNF629Q9UEG4 869 aaPredicted RBP22.34■■□□□ 1.17
TTC39C-209ENST00000584250 MAST4O15021 2626 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 DVL2O14641 736 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TNFSF11O14788 317 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 CXCL13O43927 109 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 AQP8O94778 261 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TROVE2P10155 538 aaKnown RBP eCLIP22.33■■□□□ 1.17
TTC39C-209ENST00000584250 RYKP34925 604 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 EIF1AXP47813 144 aaKnown RBP22.33■■□□□ 1.17
TTC39C-209ENST00000584250 CHMP1BQ7LBR1 199 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 VRK2Q86Y07 508 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 MCEMP1Q8IX19 187 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 LILRA2Q8N149 483 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 ATP6V1C2Q8NEY4 427 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TOR1AIP2Q8NFQ8 470 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 OR10D3Q8NH80 312 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TMEM19Q96HH6 336 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 MTHFD2LQ9H903 347 aaPredicted RBP22.33■■□□□ 1.17
TTC39C-209ENST00000584250 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.33■■□□□ 1.17
TTC39C-209ENST00000584250 P2RX2Q9UBL9 471 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 TRIM33Q9UPN9 1127 aa22.33■■□□□ 1.17
TTC39C-209ENST00000584250 GPC6Q9Y625 555 aaPredicted RBP22.33■■□□□ 1.17
TTC39C-209ENST00000584250 DSPPQ9NZW4 1301 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 AP3D1O14617 1153 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 ARFIP2P53365 341 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 SESN3P58005 492 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 CBFBQ13951 182 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 SLC25A53Q5H9E4 307 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 P4HA3Q7Z4N8 544 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 ZNF317Q96PQ6 595 aaPredicted RBP22.32■■□□□ 1.16
TTC39C-209ENST00000584250 SPOCK3Q9BQ16 436 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 RSPO3Q9BXY4 272 aaPredicted RBP22.32■■□□□ 1.16
TTC39C-209ENST00000584250 RABEP2Q9H5N1 569 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 RLIMQ9NVW2 624 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 DNAJB12Q9NXW2 375 aaKnown RBP22.32■■□□□ 1.16
TTC39C-209ENST00000584250 SLC35A3Q9Y2D2 325 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 FBN2P35556 2912 aa22.32■■□□□ 1.16
TTC39C-209ENST00000584250 ETV2O00321 342 aaPredicted RBP22.31■■□□□ 1.16
TTC39C-209ENST00000584250 ADAMDEC1O15204 470 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 TNFSF13O75888 250 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 BMP2P12643 396 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 EIF1P41567 113 aaKnown RBP22.31■■□□□ 1.16
TTC39C-209ENST00000584250 MAGEA8P43361 318 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 EEFSECP57772 596 aaKnown RBP22.31■■□□□ 1.16
TTC39C-209ENST00000584250 IRX1P78414 480 aaPredicted RBP22.31■■□□□ 1.16
TTC39C-209ENST00000584250 SGCBQ16585 318 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 MRPL2Q5T653 305 aaKnown RBP22.31■■□□□ 1.16
TTC39C-209ENST00000584250 METTL21CQ5VZV1 264 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 OR2V1Q8NHB1 315 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 WDR60Q8WVS4 1066 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 MRGPRX4Q96LA9 322 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 CHST2Q9Y4C5 530 aa22.31■■□□□ 1.16
TTC39C-209ENST00000584250 ABCA12Q86UK0 2595 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 A0A1W2PNV4 684 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 EEF1E1-BLOC1S5C9J1V9 151 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 EEF1E1O43324 174 aaKnown RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 RPS3AP61247 264 aaKnown RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 SELPLGQ14242 412 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 TMEM176BQ3YBM2 270 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 PPP4R4Q6NUP7 873 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 VWA1Q6PCB0 445 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 ZNF836Q6ZNA1 936 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 DMRTC2Q8IXT2 367 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 OIT3Q8WWZ8 545 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 KLHL15Q96M94 604 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 CPPED1Q9BRF8 314 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 COQ10BQ9H8M1 238 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 JKAMPQ9P055 326 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.3■■□□□ 1.16
TTC39C-209ENST00000584250 ZNF175Q9Y473 711 aa22.3■■□□□ 1.16
TTC39C-209ENST00000584250 FBP2O00757 339 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 IL18BPO95998 194 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 NID1P14543 1247 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 ME2P23368 584 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 ELK4P28324 431 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 ADH6P28332 368 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 UQCRC1P31930 480 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 OPRM1P35372 400 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 ASCL1P50553 236 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 CRISP3P54108 245 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 SIRPAP78324 504 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 HBMQ6B0K9 141 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 OR52P1PQ8NH57 321 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 OSTF1Q92882 214 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 SRXN1Q9BYN0 137 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 RNF122Q9H9V4 155 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 A4GALTQ9NPC4 353 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms