RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 HOXB9P17482 250 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PGCP20142 388 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 IL11P20809 199 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PPIBP23284 216 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ELK4P28324 431 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ADH6P28332 368 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 RYKP34925 604 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 SFTPDP35247 375 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 OPRM1P35372 400 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PGM1P36871 562 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 KCNJ10P78508 379 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 TFF3Q07654 80 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 FOXF2Q12947 444 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 FADDQ13158 208 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PON3Q15166 354 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 MSRB3Q8IXL7 192 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 LILRA2Q8N149 483 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 METTL25Q8N6Q8 603 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ATP6V1C2Q8NEY4 427 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF563Q8TA94 476 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 SLC38A5Q8WUX1 472 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 FIG4Q92562 907 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 MRGPRX4Q96LA9 322 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ZFP3Q96NJ6 502 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 PRRG4Q9BZD6 226 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 VAPAQ9P0L0 249 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 NDUFAF1Q9Y375 327 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF175Q9Y473 711 aa11.34□□□□□ -0.59
SMARCE1-218ENST00000582955 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 CXCL13O43927 109 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 BCAS1O75363 584 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 SYNGR4O95473 234 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 NUDT7P0C024 238 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 TFPTP0C1Z6 253 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 ASCL1P50553 236 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 MAPK11Q15759 364 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 RPS26P11Q5JNZ5 115 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 GCNT6Q5T4J0 391 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 AP1ARQ63HQ0 302 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 POMZP3Q6PJE2 187 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 ESPNLQ6ZVH7 1005 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 MCEMP1Q8IX19 187 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 CMIPQ8IY22 773 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 OR52P1PQ8NH57 321 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 OR2V1Q8NHB1 315 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 FNDC9Q8TBE3 224 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 TMEM234Q8WY98 164 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 ST8SIA1Q92185 356 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 CNOT9Q92600 299 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 PMM1Q92871 262 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 MAL2Q969L2 176 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF524Q96C55 264 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 LRRC46Q96FV0 321 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 KLHL15Q96M94 604 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 SFXN3Q9BWM7 321 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 A4GALTQ9NPC4 353 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 PAQR5Q9NXK6 330 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
SMARCE1-218ENST00000582955 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 A0A0G2JPF8 293 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 A0A0J9YW62 118 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 GJE1A6NN92 205 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 HNRNPCL2B2RXH8 293 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 HNRNPCL3B7ZW38 293 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 C5orf58C9J3I9 102 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 IL18BPO95998 194 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 HNRNPCL4P0DMR1 293 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 FCGR2AP12318 317 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 NID1P14543 1247 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 RPS4Y1P22090 263 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SHC1P29353 583 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 UQCRC1P31930 480 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC6A8P48029 635 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SESN3P58005 492 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SIRPAP78324 504 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 MERTKQ12866 999 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SELENBP1Q13228 472 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 NFYCQ13952 458 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 CTU2Q2VPK5 515 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 LIN52Q52LA3 116 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC25A53Q5H9E4 307 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 MRPL2Q5T653 305 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 CNEP1R1Q8N9A8 125 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 TSPEARQ8WU66 669 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 ADGRG7Q96K78 797 aa11.32□□□□□ -0.6
SMARCE1-218ENST00000582955 ENKD1Q9H0I2 346 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms