RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RPP38P78345 283 aaKnown RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 CFHR1Q03591 330 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 NPRL3Q12980 569 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ZNF628Q5EBL2 1059 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 PDZK1Q5T2W1 519 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GPR139Q6DWJ6 353 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 CDC73Q6P1J9 531 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ZNF367Q7RTV3 350 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 LAX1Q8IWV1 398 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 SLC5A8Q8N695 610 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 OR52H1Q8NGJ2 320 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 UFD1Q92890 307 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 PDE7BQ9NP56 450 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 MCUBQ9NWR8 336 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 CALML5Q9NZT1 146 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 FER1L5A0AVI2 2057 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 DSPPQ9NZW4 1301 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ARRDC5A6NEK1 342 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 FFAR1O14842 300 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 WDPCPO95876 746 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 RAF1P04049 648 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 TPOP07202 933 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 IFI6P09912 130 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 RORCP51449 518 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 BTN1A1Q13410 526 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GANABQ14697 944 aaKnown RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 POU4F3Q15319 338 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ZMYND11Q15326 602 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 COL28A1Q2UY09 1125 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 PLK5Q496M5 336 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 FHL5Q5TD97 284 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 FAM131AQ6UXB0 335 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 KANSL1Q7Z3B3 1105 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 GGHQ92820 318 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ANKRD9Q96BM1 317 aaPredicted RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
RNF43-202ENST00000577625 CLCA2Q9UQC9 943 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 FKBP7Q9Y680 259 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 VPS13AQ96RL7 3174 aa12.8□□□□□ -0.36
RNF43-202ENST00000577625 ASCC3Q8N3C0 2202 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 A0A087WV62 115 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 H0YC42 278 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 CASC3O15234 703 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 PLA2G10O15496 165 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 DUX1O43812 170 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SEMA7AO75326 666 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 AGR2O95994 175 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 PAHP00439 452 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 PTHP01270 115 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 EPHA2P29317 976 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 EPHA8P29322 1005 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 CSF2RBP32927 897 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 GPR3P46089 330 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SKP1P63208 163 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 FAM53BQ14153 422 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ZNF273Q14593 569 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 TRMT12Q53H54 448 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 WDR53Q7Z5U6 358 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 OR4D11Q8NGI4 311 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ADAMTS15Q8TE58 950 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 EDAQ92838 391 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RBPMSQ93062 196 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 KLHL15Q96M94 604 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SLC6A15Q9H2J7 730 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ACAD8Q9UKU7 415 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 C19orf53Q9UNZ5 99 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 POFUT2Q9Y2G5 429 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 HYKKA2RU49 373 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 PCDH17O14917 1159 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 PLOD3O60568 738 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 CCNB2O95067 398 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 NSA2O95478 260 aaKnown RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 IFNA7P01567 189 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 TP53P04637 393 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 HSMCR30P0CW71 290 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ZP3P21754 424 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 MAP2K3P46734 347 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 GPR85P60893 370 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RUNX1T1Q06455 604 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 AMZ1Q400G9 498 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 CFAP77Q6ZQR2 320 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 COMTD1Q86VU5 262 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SLC16A11Q8NCK7 471 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms