RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CARFQ8N187 725 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 LNX2Q8N448 690 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 OR1L3Q8NH93 324 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 PTPMT1Q8WUK0 201 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 EFHD2Q96C19 240 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 MVB12AQ96EY5 273 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 TRMT61AQ96FX7 289 aaKnown RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 SENP5Q96HI0 755 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 FAIMQ9NVQ4 179 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 CABIN1Q9Y6J0 2220 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 A8MUA0 341 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 NGFRP08138 427 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 PAICSP22234 425 aaKnown RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 RBM34P42696 430 aaKnown RBP12.94□□□□□ -0.34
VPS33B-208ENST00000574755 PPP5CP53041 499 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 GPLD1P80108 840 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 DSG2Q14126 1118 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 ULK3Q6PHR2 472 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 OAFQ86UD1 273 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 OR7G1Q8NGA0 311 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 SLC35B4Q969S0 331 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 OR1F2PQ96R84 312 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 LMF1Q96S06 567 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 NDC1Q9BTX1 674 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF426Q9BUY5 554 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 NUAK2Q9H093 628 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 RERGLQ9H628 205 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 MMACHCQ9Y4U1 282 aa12.94□□□□□ -0.34
VPS33B-208ENST00000574755 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 GNB5O14775 395 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 DYRK3O43781 588 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 HCN1O60741 890 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 FOLR1P15328 257 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 IFITM3Q01628 133 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ZP2Q05996 745 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 KIRREL2Q6UWL6 708 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 MED25Q71SY5 747 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 D2HGDHQ8N465 521 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF321PQ8N8H1 164 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 OR51G2Q8NGK0 314 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TSLPQ969D9 159 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 OR8D2Q9GZM6 311 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 FN3KQ9H479 309 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 MED20Q9H944 212 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CLCA3PQ9Y6N3 262 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ZNF670-ZNF695F2Z2N8 137 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 POLR1CO15160 346 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 GIMD1P0DJR0 217 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 HPGDP15428 266 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CD40LGP29965 261 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 RPS19P39019 145 aaKnown RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CD79BP40259 229 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ARRB1P49407 418 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 PSMD7P51665 324 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 SLC37A1P57057 533 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 FOXK2Q01167 660 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 NIPAL3Q6P499 406 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TSSK4Q6SA08 328 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TMEM151BQ8IW70 566 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 PSD4Q8NDX1 1056 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 UFD1Q92890 307 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 KCNS3Q9BQ31 491 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ARHGAP9Q9BRR9 750 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 ERVMER34-1Q9H9K5 563 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 CMC2Q9NRP2 79 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 TNFRSF10DQ9UBN6 386 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 EXOGQ9Y2C4 368 aaKnown RBP12.93□□□□□ -0.34
VPS33B-208ENST00000574755 PEX16Q9Y5Y5 336 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 HEATR5AQ86XA9 2040 aa12.93□□□□□ -0.34
VPS33B-208ENST00000574755 MN1Q10571 1320 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SEC16AO15027 2179 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 RP1P56715 2156 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 CBFA2T3O75081 653 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 COPZ1P61923 177 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 FCRLBQ6BAA4 426 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 QSOX2Q6ZRP7 698 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 SIRT6Q8N6T7 355 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 OR4C6Q8NH72 309 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 ISYNA1Q9NPH2 558 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 TXNL4BQ9NX01 149 aaKnown RBP12.92□□□□□ -0.34
VPS33B-208ENST00000574755 COL6A3P12111 3177 aa12.92□□□□□ -0.34
VPS33B-208ENST00000574755 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms