RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TBC1D3BA6NDS4 549 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 FAM86C2PA6NEL3 165 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 I3L521 148 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SBK2P0C263 348 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 ATF1P18846 271 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 PEBP1P30086 187 aaKnown RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 AP2S1P53680 142 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SHC2P98077 582 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF85Q03923 595 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 OR1Q1Q15612 314 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 ZSWIM7Q19AV6 140 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 TJAP1Q5JTD0 557 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 CD276Q5ZPR3 534 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 TPRA1Q86W33 373 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 GIMAP1Q8WWP7 306 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 PGLYRP3Q96LB9 341 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 BRD7Q9NPI1 651 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF223Q9UK11 482 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 TRAPPC13A5PLN9 417 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 C1QTNF3-AMACRE9PGA6 284 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SSNA1O43805 119 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 TPOP07202 933 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SIM1P81133 766 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 RGS1Q08116 209 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 CRMP1Q14194 572 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 LGALSLQ3ZCW2 172 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 RANBP3LQ86VV4 465 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 LNX2Q8N448 690 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SMPDL3BQ92485 455 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 PEX11GQ96HA9 241 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 OR2M2Q96R28 347 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SDF2Q99470 211 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 FN3KQ9H479 309 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 MRPL39Q9NYK5 338 aaKnown RBP16.19■□□□□ 0.18
SCARF1-205ENST00000571272 INSL6Q9Y581 213 aa16.19■□□□□ 0.18
SCARF1-205ENST00000571272 SLC22A31A6NKX4 558 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 PEX12O00623 359 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF250P15622 560 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 SLC44A3Q8N4M1 653 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 MS4A4EQ96PG1 132 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 CCDC86Q9H6F5 360 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ERVMER34-1Q9H9K5 563 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ADGRL4Q9HBW9 690 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 EVA1BQ9NVM1 165 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 EIF3KQ9UBQ5 218 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ATG2BQ96BY7 2078 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 GPR171O14626 319 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 SHOXO15266 292 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 DNAJB6O75190 326 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 PDGFAP04085 211 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 H2AFB2P0C5Z0 115 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 VSX2P58304 361 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 EEF1A1P68104 462 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 GSG1Q2KHT4 349 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 TP53I3Q53FA7 332 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 TRMT12Q53H54 448 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 MRPL2Q5T653 305 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 PXKQ7Z7A4 578 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 GPALPP1Q8IXQ4 340 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 SHISA5Q8N114 240 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 LRRC25Q8N386 305 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ARL14Q8N4G2 192 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 ADAP2Q9NPF8 381 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 PRSS16Q9NQE7 514 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 CMC2Q9NRP2 79 aa16.18■□□□□ 0.18
SCARF1-205ENST00000571272 USP36Q9P275 1121 aaKnown RBP16.18■□□□□ 0.18
SCARF1-205ENST00000571272 LINC00862A6NCI5 91 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 MID1O15344 667 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 WNT1P04628 370 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF888P0CJ79 500 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 DNASE1P24855 282 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 DRD3P35462 400 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 ARFIP1P53367 373 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 CEBPEQ15744 281 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 SRFBP1Q8NEF9 429 aaKnown RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 TOR1AIP2Q8NFQ8 470 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 OR51L1Q8NGJ5 315 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 ZCCHC10Q8TBK6 192 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 LRRC20Q8TCA0 184 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 BPIFA2Q96DR5 249 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 C10orf90Q96M02 699 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 AUNIPQ9H7T9 357 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 AK6Q9Y3D8 172 aaKnown RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 UBL3O95164 117 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 PPP1R3DO95685 299 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 SNTB2Q13425 540 aaKnown RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 CAMK2DQ13557 499 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 IRF4Q15306 451 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 GET4Q7L5D6 327 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 GRHL3Q8TE85 626 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 ADAMTS14Q8WXS8 1223 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 THAP4Q8WY91 577 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 GCDHQ92947 438 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-205ENST00000571272 SORCS2Q96PQ0 1159 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 KCNN3Q9UGI6 736 aa16.17■□□□□ 0.18
SCARF1-205ENST00000571272 PRICKLE3O43900 615 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SC5DO75845 299 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 MPC2O95563 127 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms