RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	SHISA3	A0PJX4	238 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	FEZF1	A0PJY2	475 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SLC22A23	A1A5C7	686 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	MFSD2B	A6NFX1	497 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	FAAH	O00519	579 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	CASC3	O15234	703 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SIGLEC6	O43699	453 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SEMA4F	O95754	770 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	LALBA	P00709	142 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	HRG	P04196	525 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	TCRB	P04435	133 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	HLA-DPB1	P04440	258 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SRF	P11831	508 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ELAVL4	P26378	380 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	PCBP3	P57721	371 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	CSNK1G2	P78368	415 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	PDE7A	Q13946	482 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ANKRD39	Q53RE8	183 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	HES5	Q5TA89	166 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SLC9B2	Q86UD5	537 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	FTMT	Q8N4E7	242 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	OR8D4	Q8NGM9	314 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	C16orf78	Q8WTQ4	265 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ACOT12	Q8WYK0	555 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	TSACC	Q96A04	125 aa	Predicted RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	UBL7	Q96S82	380 aa	Predicted RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	REG4	Q9BYZ8	158 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	REEP4	Q9H6H4	257 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ESRP2	Q9H6T0	727 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	MED9	Q9NWA0	146 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	CTSF	Q9UBX1	484 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	CLCA2	Q9UQC9	943 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	IRGM	A1A4Y4	181 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	GABRP	O00591	440 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PLPP1	O14494	284 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	EEF1E1	O43324	174 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PRICKLE3	O43900	615 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	APBB3	O95704	486 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	C6orf47	O95873	294 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	IGLV3-19	P01714	112 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	GLA	P06280	429 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	KLK1	P06870	262 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	FURIN	P09958	794 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	SULT1A3	P0DMM9	295 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	SULT1A4	P0DMN0	295 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	TFPI	P10646	304 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	AHCY	P23526	432 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	AK4	P27144	223 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PEBP1	P30086	187 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	MC1R	Q01726	317 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PRDX1	Q06830	199 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	RAB40B	Q12829	278 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	TCEA2	Q15560	299 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ETFDH	Q16134	617 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	SLC25A30	Q5SVS4	291 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	FAM71E1	Q6IPT2	247 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	OR2T35	Q8NGX2	323 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	OR5AK3P	Q8NH89	298 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	RNFT2	Q96EX2	444 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ARHGAP9	Q9BRR9	750 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ZCCHC4	Q9H5U6	513 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	COPZ2	Q9P299	210 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PLCL2	Q9UPR0	1127 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ANKDD1B	A6NHY2	528 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	SSNA1	O43805	119 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	EIF1B	O60739	113 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	TOX	O94900	526 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	IGHV4-34	P06331	123 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ARAF	P10398	606 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ACP2	P11117	423 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	LCN1	P31025	176 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	SOX18	P35713	384 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	EIF1	P41567	113 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	KRT33B	Q14525	404 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	IDNK	Q5T6J7	187 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	PGBD2	Q6P3X8	592 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	LRRC28	Q86X40	367 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	ARIH2OS	Q8N7S6	290 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	OR6S1	Q8NH40	331 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	CCL4L1	Q8NHW4	92 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	HSD17B8	Q92506	261 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	TEFM	Q96QE5	360 aa	Known RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	GAS2L1	Q99501	681 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	KIR3DX1	Q9H7L2	352 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	FGF20	Q9NP95	211 aa	Predicted RBP	11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	GSN-AS1	Q9NRJ2	163 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	CYSLTR2	Q9NS75	346 aa		11.14	□□□□□ -0.63
SPG7-222	ENST00000569820	C2orf92	A0A1B0GVN3	265 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	PMS2P1	A4D2B8	440 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	TNFRSF10C	O14798	259 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	H1F0	P07305	194 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	GAA	P10253	952 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	PEPD	P12955	493 aa		11.13	□□□□□ -0.63

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