RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NTN4Q9HB63 628 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 OBP2BQ9NPH6 170 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 SERINC1Q9NRX5 453 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 DDX28Q9NUL7 540 aaKnown RBP7.58□□□□□ -1.2
SMG1-216ENST00000569122 PARPBPQ9NWS1 579 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 HIF1ANQ9NWT6 349 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 MED29Q9NX70 200 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 TAS2R7Q9NYW3 318 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 MALT1Q9UDY8 824 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 DCTN4Q9UJW0 460 aa7.58□□□□□ -1.2
SMG1-216ENST00000569122 PRR14LQ5THK1 2151 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 IGKV3D-15A0A087WSY6 115 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 TRAV20A0A0B4J274 112 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CCDC151A5D8V7 595 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 FAM159BA6NKW6 160 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CXorf49A8MYA2 514 aaPredicted RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 C9JVG2 144 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 EIF3HO15372 352 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMG1-216ENST00000569122 SMIM24O75264 130 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 SEC31AO94979 1220 aaKnown RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 KLHL2O95198 593 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CRYAAP02489 173 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 TFP02787 698 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 JUNP05412 331 aaKnown RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 CTAGE8P0CG41 777 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 HKR1P10072 659 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 PRPS2P11908 318 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 PGCP20142 388 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 FPR2P25090 351 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 FKBP2P26885 142 aaKnown RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 P2RX1P51575 399 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ACSM2AQ08AH3 577 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 FOXF1Q12946 379 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 TRAF3Q13114 568 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 NAB1Q13506 487 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 GABRA6Q16445 453 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ACSM2BQ68CK6 577 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 C3orf33Q6P1S2 294 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ZCCHC12Q6PEW1 402 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 RBMS3Q6XE24 437 aaKnown RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 SPATA19Q7Z5L4 167 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CMC1Q7Z7K0 106 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CTAGE4Q8IX94 777 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 SVOPLQ8N434 492 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 PTGR2Q8N8N7 351 aaPredicted RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 ANKS4BQ8N8V4 417 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 GATSQ8NAP1 163 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ATP6V1C2Q8NEY4 427 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 OR4F15Q8NGB8 312 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 OR4F6Q8NGB9 312 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 OR51F2Q8NH61 342 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 UBASH3BQ8TF42 649 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 C16orf78Q8WTQ4 265 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ZNF75CPQ92670 426 aaPredicted RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 PHF21BQ96EK2 531 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 NPAS1Q99742 590 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 C1QTNF6Q9BXI9 259 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CDC42EP4Q9H3Q1 356 aaKnown RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 PLK3Q9H4B4 646 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 SLC52A3Q9NQ40 469 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 MIEF1Q9NQG6 463 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 SLC17A5Q9NRA2 495 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 CA10Q9NS85 328 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 UPB1Q9UBR1 384 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 ING1Q9UK53 422 aaPredicted RBP7.57□□□□□ -1.2
SMG1-216ENST00000569122 MOKQ9UQ07 419 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 TRAF6Q9Y4K3 522 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 PTGDR2Q9Y5Y4 395 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 EXPH5Q8NEV8 1989 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
SMG1-216ENST00000569122 TRRAPQ9Y4A5 3859 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 IGHV3-15A0A0B4J1V0 119 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 A0A1W2PR80 420 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 TCRBV9S1A1TA0A576 114 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 GXYLT2A0PJZ3 443 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 ATP6V1G2-DDX39BF2Z307 99 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 GTPBP1O00178 669 aaKnown RBP7.56□□□□□ -1.2
SMG1-216ENST00000569122 ULK1O75385 1050 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 PIAS1O75925 651 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 NKX2-2O95096 273 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 C2P06681 752 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 MSMBP08118 114 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 OR4A8P0C604 315 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 ATP6V1C1P21283 382 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 SHC1P29353 583 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 SSTR1P30872 391 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 IL2RGP31785 369 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 PRIM2P49643 509 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 DR1Q01658 176 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 RIN1Q13671 783 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 FASTKD3Q14CZ7 662 aaKnown RBP7.56□□□□□ -1.2
SMG1-216ENST00000569122 REP15Q6BDI9 236 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 HIST2H2BDQ6DRA6 164 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 FAHD2BQ6P2I3 314 aaPredicted RBP7.56□□□□□ -1.2
SMG1-216ENST00000569122 GALNT18Q6P9A2 607 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 TMPPEQ6ZT21 453 aa7.56□□□□□ -1.2
SMG1-216ENST00000569122 ABHD12BQ7Z5M8 362 aaPredicted RBP7.56□□□□□ -1.2
SMG1-216ENST00000569122 MTDHQ86UE4 582 aaKnown RBP7.56□□□□□ -1.2
SMG1-216ENST00000569122 CENPLQ8N0S6 344 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms