RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 HIST1H2BAQ96A08 127 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 LRR1Q96L50 414 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 REEP1Q9H902 201 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CERS4Q9HA82 394 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CYSLTR2Q9NS75 346 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TAS2R3Q9NYW6 316 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 NUDT4Q9NZJ9 180 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZMIZ1Q9ULJ6 1067 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TRDV1A0A1B0GX56 115 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MEX3AA1L020 520 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR51F1A6NGY5 319 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR6C75A6NL08 312 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF891A8MT65 544 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 GPR31O00270 319 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SLC17A3O00476 420 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CYTIPO60759 359 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NFATC1O95644 943 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MNDAP41218 407 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RAD52P43351 418 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ARSDP51689 593 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SNRPEP62304 92 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 DGCR2P98153 550 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 IL10RAQ13651 578 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 TMEM86AQ8N2M4 240 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CPEB3Q8NE35 698 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 B3GNT7Q8NFL0 401 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SPATA22Q8NHS9 363 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ELP4Q96EB1 424 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CLCC1Q96S66 551 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OSER1Q9NX31 292 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 LOC285095A0A1B0GVY8 99 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GXYLT2A0PJZ3 443 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 WASH3PC4AMC7 463 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RGS11O94810 467 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MMP2P08253 660 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NR2F6P10588 404 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 UBA1P22314 1058 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 P2RY4P51582 365 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PRKAG1P54619 331 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MLF1P58340 268 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SMIM11AP58511 58 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 S100A10P60903 97 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 HNRNPKP61978 463 aaKnown RBP eCLIP2.73□□□□□ -1.975e-7■■■■□ 21.9
CHD9-218ENST00000566029 HMGCS1Q01581 520 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ECH1Q13011 328 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SPANXN4Q5MJ08 99 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C17orf107Q6ZR85 190 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR8S1Q8NH09 359 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SUSD6Q92537 303 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PNPLA2Q96AD5 504 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PABPC5Q96DU9 382 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 PYURFQ96I23 114 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR51B6Q9H340 312 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NXF3Q9H4D5 531 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 SLC22A11Q9NSA0 550 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PCDHB9Q9Y5E1 797 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NHSQ6T4R5 1651 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ANKRD31Q8N7Z5 1873 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF320A2RRD8 509 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 C5orf52A6NGY3 159 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 AGAP14A8MT82 685 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 HEPACAM2A8MVW5 462 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CYR61O00622 381 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 FFAR2O15552 330 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF207O43670 478 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 EIF4E2O60573 245 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 PEX11BO96011 259 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 EIF4EP06730 217 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 C1SP09871 688 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CPT2P23786 658 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ACAA2P42765 397 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 ASCL1P50553 236 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 RAB5CP51148 216 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 WNT3AP56704 352 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ERVFRD-1P60508 538 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 UBE2IP63279 158 aaKnown RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 SHC2P98077 582 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ERV3-1Q14264 604 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GUCA2BQ16661 112 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A30Q5SVS4 291 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 BCL2L15Q5TBC7 163 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SLC29A4Q7RTT9 530 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GPRIN1Q7Z2K8 1008 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 OR6K3Q8NGY3 331 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GPER1Q99527 375 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CHRDQ9H2X0 955 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 ZNF334Q9HCZ1 680 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 NPDC1Q9NQX5 325 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 IRAK3Q9Y616 596 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 A0A0G2JK05 382 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 NPIPB9F8W1W9 429 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 GFRA2O00451 464 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CASKO14936 926 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 MAGEB4O15481 346 aaPredicted RBP2.73□□□□□ -1.97
CHD9-218ENST00000566029 SUSD5O60279 629 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 CXCL14O95715 111 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 TCRBP04435 133 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 COX5BP10606 129 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 PAX6P26367 422 aa2.73□□□□□ -1.97
CHD9-218ENST00000566029 SLC6A4P31645 630 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms