RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 ABCG2Q9UNQ0 655 aa1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 SMC3Q9UQE7 1217 aa1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 PLEKHA6Q9Y2H5 1048 aa1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 HBS1LQ9Y450 684 aaKnown RBP1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 KLK4Q9Y5K2 254 aa1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
SUB1P3-201ENST00000564581 ANKRD36A6QL64 1941 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SMIM28A0A1B0GU29 152 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TRIM64CA6NLI5 447 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 CCT8L1PA6NM43 557 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZNF724A8MTY0 619 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 PRAMEF26H0Y7S4 382 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 C19orf84I3L1E1 186 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 I3L4J1 428 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 PES1O00541 588 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 CCL21O00585 134 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 CPLX1O14810 134 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 DKC1O60832 514 aaKnown RBP eCLIP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SDC3O75056 442 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 NOL4O94818 638 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 OLFM2O95897 454 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 OR9G9P0C7N8 305 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 NR2F1P10589 423 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 NEFHP12036 1026 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 KCNE1P15382 129 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZNF17P17021 662 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ATF6P18850 670 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 GDF1P27539 372 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 HSPA4P34932 840 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ALDH3B1P43353 468 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 HNRNPA3P51991 378 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZNF133P52736 654 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 MFAP3P55082 362 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SH3BGRP55822 239 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 RPS14P62263 151 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 KDSRQ06136 332 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 LAMTOR4Q0VGL1 99 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 FASTKQ14296 549 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TOMM20Q15388 145 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SYCP1Q15431 976 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 C17orf58Q2M2W7 97 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 DEFB113Q30KQ7 82 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 CHRFAM7AQ494W8 412 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 DCAF12Q5T6F0 453 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 REP15Q6BDI9 236 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 MZT2BQ6NZ67 158 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 GUSBP11Q6P575 273 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZCCHC12Q6PEW1 402 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ALKAL1Q6UXT8 129 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 C12orf54Q6X4T0 127 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 OTUD6AQ7L8S5 288 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 IQCA1Q86XH1 822 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SLC22A18ASQ8N1D0 253 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SLC43A2Q8N370 569 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TEX9Q8N6V9 391 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZNF781Q8N8C0 355 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 RNF149Q8NC42 400 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 LMX1AQ8TE12 382 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SLC26A7Q8TE54 656 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 N4BP2L2Q92802 583 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ATP6V1E2Q96A05 226 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 SYAP1Q96A49 352 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ZBED6CLQ96FA7 236 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 FAM210AQ96ND0 272 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ADPGKQ9BRR6 497 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TCHPQ9BT92 498 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TMEM121Q9BTD3 319 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 API5Q9BZZ5 524 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 TRIM9Q9C026 710 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 RNF41Q9H4P4 317 aaPredicted RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 DHX33Q9H6R0 707 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 FBXO8Q9NRD0 319 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 DNAJC17Q9NVM6 304 aaKnown RBP1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 ELOVL2Q9NXB9 296 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 FBXL12Q9NXK8 326 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 NSMCE4AQ9NXX6 385 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 UBQLN2Q9UHD9 624 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 APPL1Q9UKG1 709 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 MOKQ9UQ07 419 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 CPAMD8Q8IZJ3 1885 aa1.6□□□□□ -2.15
SUB1P3-201ENST00000564581 HYDINQ4G0P3 5121 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 NEDD8-MDP1E9PL57 170 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 PANO1I0J062 215 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 DDX39AO00148 427 aaKnown RBP1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 AQP9O43315 295 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CTAG2O75638 210 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 LYPD3O95274 346 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CSF2P04141 144 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CCDC175P0C221 793 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 P0C879 139 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 LBPP18428 481 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 MUTP22033 750 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 PSMB4P28070 264 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 NMT1P30419 496 aaKnown RBP1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CTNNA1P35221 906 aaKnown RBP1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CA7P43166 264 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CDX1P47902 265 aaPredicted RBP1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 SLC1A6P48664 564 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 CCL11P51671 97 aa1.59□□□□□ -2.15
SUB1P3-201ENST00000564581 STX17P56962 302 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms