RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 TCP1P17987 556 aaKnown RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 IL2RGP31785 369 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 GPC1P35052 558 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 GSTM5P46439 218 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SERPINB8P50452 374 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 MRPS25P82663 173 aaKnown RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF117Q03924 483 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 LGALS3BPQ08380 585 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF763Q0D2J5 394 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 HSPB3Q12988 150 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SELENBP1Q13228 472 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 RASA2Q15283 850 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 TRADDQ15628 312 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 CD226Q15762 336 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 MST1LQ2TV78 715 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SPDYAQ5MJ70 313 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 C9orf135Q5VTT2 229 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 OR7E24Q6IFN5 339 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SHQ1Q6PI26 577 aaKnown RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF551Q7Z340 670 aaPredicted RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SPATA19Q7Z5L4 167 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 PEG10Q86TG7 708 aaKnown RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 LRRC8AQ8IWT6 810 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 CDRT4Q8N9R6 151 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 CEP70Q8NHQ1 597 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 RFWD2Q8NHY2 731 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 METTL6Q8TCB7 284 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF483Q8TF39 744 aaPredicted RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 FAM216AQ8WUB2 273 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF75CPQ92670 426 aaPredicted RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 HPS1Q92902 700 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 APH1AQ96BI3 265 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ARL8AQ96BM9 186 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 CHMP6Q96FZ7 201 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 OR5B2Q96R09 309 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 SNX18Q96RF0 628 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ACPTQ9BZG2 426 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ASB6Q9NWX5 421 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 TAS2R16Q9NYV7 291 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 EMC3Q9P0I2 261 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF225Q9UK10 706 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 MOKQ9UQ07 419 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 NOSIPQ9Y314 301 aaKnown RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 GPC6Q9Y625 555 aaPredicted RBP6.41□□□□□ -1.38
VPS4A-203ENST00000564399 WNK1Q9H4A3 2382 aa6.41□□□□□ -1.38
VPS4A-203ENST00000564399 A0A0G2JK05 382 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 A0A1W2PQD3 144 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 HMX2A2RU54 273 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 H3BNH8 94 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CCDC188H7C350 402 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SULT2B1O00204 365 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 OIP5O43482 229 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 LILRA1O75019 489 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 MRPL33O75394 65 aaKnown RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SUPT7LO94864 414 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SLU7O95391 586 aaKnown RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 STAMBPO95630 424 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 ALOX5P09917 674 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 ACP2P11117 423 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 PRKCAP17252 672 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 LCN1P31025 176 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SERPINF1P36955 418 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 HSD17B3P37058 310 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 MAGEA4P43358 317 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SERPINB4P48594 390 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 HTR6P50406 440 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 P2RX1P51575 399 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CCR4P51679 360 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 DVL1P1P54792 670 aaPredicted RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CDH15P55291 814 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 FOXG1P55316 489 aaPredicted RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CLCQ05315 142 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CCNIQ14094 377 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 TOMM34Q15785 309 aaPredicted RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 GABRA6Q16445 453 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 ZSWIM7Q19AV6 140 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 PRR31Q5SQ13 230 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CCNJQ5T5M9 372 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 FAM71E1Q6IPT2 247 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 GALNT18Q6P9A2 607 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 CBLN3Q6UW01 205 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 UGT2A3Q6UWM9 527 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 LRIG3Q6UXM1 1119 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 THSD4Q6ZMP0 1018 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 IKBIPQ70UQ0 350 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.38
VPS4A-203ENST00000564399 GLCCI1Q86VQ1 547 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 GAS2L3Q86XJ1 694 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 TMCO5AQ8N6Q1 288 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 ZNF614Q8N883 585 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 COX18Q8N8Q8 333 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 WDR31Q8NA23 367 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 SLC16A11Q8NCK7 471 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 NUP43Q8NFH3 380 aa6.4□□□□□ -1.38
VPS4A-203ENST00000564399 GPR119Q8TDV5 335 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms